CABIN学习

收到NCBI的邮件，认识了CABIN：一个Cytoscape的插件，整合多个interaction数据库，设定信任度值，然后就可以生成一个比较可信的相互作用网络——确实不错！

顺便看了一下Cytoscape，感觉这是一个插件比较多的生物网络可视化平台，但是文件格式比较特殊：cys，不适合进行软件交流。同时Cytoscape并不提供插件开发的类库——很遗憾的一点。
在cytoscape的lib目录下发现一个叫做swing-layout-1.0.1.jar的东西，下次需要的时候好好看看。
不过佩服开发Cytoscape的这些家伙：yFiles和JGraph全都引进：白花花的银子啊！

The CABIN, version 2.1, was released on June, 2007.
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CABIN makes use of publicly available libraries:

Colt: Colt provides a set of Open Source Libraries for High Performance Scientific and Technical Computing in Java.
http://dsd.lbl.gov/~hoschek/colt/

JFreeChart: JFreeChart is a free 100% Java chart library that makes it easy for developers to display professional quality charts in their applications.
http://www.jfree.org/jfreechart/

jMatrixView: The JMatrixView project is aimed at matrix visualization.
http://jmatrixview.sourceforge.net/

BiSlider: The goal of the bislider project is to provide to the java developper community a rich java implementation of a range slider.
https://bislider.dev.java.net/