Alluxio 1.6.1 与Spark SQL结合使用踩坑总结

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最新推荐文章于 2022-07-14 13:50:00 发布

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分类专栏： alluxio spark经验总结文章标签： alluxio Spark

本文链接：https://blog.csdn.net/xwc35047/article/details/79657527

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1、扫表问题

表不存在hdfs，但在元数据中

java.lang.RuntimeException: serious problem
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat.generateSplitsInfo(OrcInputFormat.java:1021)
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat.getSplits(OrcInputFormat.java:1048)
        at org.apache.spark.rdd.HadoopRDD.getPartitions(HadoopRDD.scala:199)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
        at scala.Option.getOrElse(Option.scala:121)
        at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
        at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
        at scala.Option.getOrElse(Option.scala:121)
        at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
        at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
        at scala.Option.getOrElse(Option.scala:121)
        at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
        at org.apache.spark.rdd.UnionRDD$$anonfun$1.apply(UnionRDD.scala:84)
        at org.apache.spark.rdd.UnionRDD$$anonfun$1.apply(UnionRDD.scala:84)
        at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:234)
        at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:234)
        at scala.collection.immutable.List.foreach(List.scala:381)
        at scala.collection.TraversableLike$class.map(TraversableLike.scala:234)
        at scala.collection.immutable.List.map(List.scala:285)
        at org.apache.spark.rdd.UnionRDD.getPartitions(UnionRDD.scala:84)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
        at scala.Option.getOrElse(Option.scala:121)
        at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
        at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
        at scala.Option.getOrElse(Option.scala:121)
        at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
        at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
        at scala.Option.getOrElse(Option.scala:121)
        at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
        at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:314)
        at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:38)
        at org.apache.spark.sql.Dataset.org$apache$spark$sql$Dataset$$collectFromPlan(Dataset.scala:2861)
        at org.apache.spark.sql.Dataset$$anonfun$collect$1.apply(Dataset.scala:2387)
        at org.apache.spark.sql.Dataset$$anonfun$collect$1.apply(Dataset.scala:2387)
        at org.apache.spark.sql.Dataset$$anonfun$55.apply(Dataset.scala:2842)
        at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:65)
        at org.apache.spark.sql.Dataset.withAction(Dataset.scala:2841)
        at org.apache.spark.sql.Dataset.collect(Dataset.scala:2387)
        at org.apache.spark.sql.hive.thriftserver.SparkExecuteStatementOperation.org$apache$spark$sql$hive$thriftserver$SparkExecuteStatementOperation$$execute(SparkExecuteStatementOperation.scala:245)
        at org.apache.spark.sql.hive.thriftserver.SparkExecuteStatementOperation$$anon$1$$anon$2.run(SparkExecuteStatementOperation.scala:174)
        at org.apache.spark.sql.hive.thriftserver.SparkExecuteStatementOperation$$anon$1$$anon$2.run(SparkExecuteStatementOperation.scala:171)
        at java.security.AccessController.doPrivileged(Native Method)
        at javax.security.auth.Subject.doAs(Subject.java:422)
        at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1628)
        at org.apache.spark.sql.hive.thriftserver.SparkExecuteStatementOperation$$anon$1.run(SparkExecuteStatementOperation.scala:184)
        at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
        at java.util.concurrent.FutureTask.run(FutureTask.java:266)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)
Caused by: java.util.concurrent.ExecutionException: java.io.FileNotFoundException: /user/hive/warehouse/online.db/bl_molive_event_detail/partition_date=20170913
        at java.util.concurrent.FutureTask.report(FutureTask.java:122)
        at java.util.concurrent.FutureTask.get(FutureTask.java:192)
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat.generateSplitsInfo(OrcInputFormat.java:998)
        ... 59 more
Caused by: java.io.FileNotFoundException: /user/hive/warehouse/online.db/bl_molive_event_detail/partition_date=20170913
        at alluxio.hadoop.AbstractFileSystem.listStatus(AbstractFileSystem.java:577)
        at alluxio.hadoop.FileSystem.listStatus(FileSystem.java:27)
        at org.apache.hadoop.fs.FileSystem.listStatus(FileSystem.java:1485)
        at org.apache.hadoop.fs.FileSystem.listStatus(FileSystem.java:1525)
        at org.apache.hadoop.fs.FileSystem$4.<init>(FileSystem.java:1682)
        at org.apache.hadoop.fs.FileSystem.listLocatedStatus(FileSystem.java:1681)
        at org.apache.hadoop.fs.FileSystem.listLocatedStatus(FileSystem.java:1664)
        at org.apache.hadoop.hive.shims.Hadoop23Shims.listLocatedStatus(Hadoop23Shims.java:667)
        at org.apache.hadoop.hive.ql.io.AcidUtils.getAcidState(AcidUtils.java:361)
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat$FileGenerator.call(OrcInputFormat.java:634)
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat$FileGenerator.call(OrcInputFormat.java:620)
        ... 4 more

解决方法：删除hdfs数据不存在的元数据信息，这个错误在Hue/MR同样存在

2、内存块丢失报错

内存数据丢失，导致报错

18/01/25 10:53:09 WARN NettyPacketReader: Channel [id: 0xbb4b2c91, /10.88.61.73:19948 :> /10.88.77.41:29999] is closed while reading from 352019546113.
18/01/25 10:53:09 ERROR NettyPacketReader: Exception caught while reading from 347774910465.
alluxio.exception.status.NotFoundException: Channel to /10.88.77.40:29999: /mnt/ramdisk/alluxioworker/347774910465 (No such file or directory)
        at alluxio.exception.status.AlluxioStatusException.from(AlluxioStatusException.java:153)
        at alluxio.util.CommonUtils.unwrapResponseFrom(CommonUtils.java:548)
        at alluxio.client.block.stream.NettyPacketReader$PacketReadHandler.channelRead(NettyPacketReader.java:268)
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
        at io.netty.channel.ChannelInboundHandlerAdapter.channelRead(ChannelInboundHandlerAdapter.java:86)
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
        at io.netty.handler.timeout.IdleStateHandler.channelRead(IdleStateHandler.java:266)
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
        at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:103)
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
        at io.netty.handler.codec.ByteToMessageDecoder.channelRead(ByteToMessageDecoder.java:244)
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:308)
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:294)
        at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:846)
        at io.netty.channel.epoll.AbstractEpollStreamChannel$EpollStreamUnsafe.epollInReady(AbstractEpollStreamChannel.java:831)
        at io.netty.channel.epoll.EpollEventLoop.processReady(EpollEventLoop.java:346)
        at io.netty.channel.epoll.EpollEventLoop.run(EpollEventLoop.java:254)
        at io.netty.util.concurrent.SingleThreadEventEx

3、alluxio 连接中断

读block块过程中报错，然后主动fireChannelUnregistered()

18/03/08 15:00:19 ERROR RPCMessageDecoder: Error in decoding message.
java.io.IOException: syscall:read(...)() failed: Connection reset by peer

Caused by: java.lang.RuntimeException: serious problem
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat.generateSplitsInfo(OrcInputFormat.java:1021)
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat.getSplits(OrcInputFormat.java:1048)
        at org.apache.spark.rdd.HadoopRDD.getPartitions(HadoopRDD.scala:199)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
        at scala.Option.getOrElse(Option.scala:121)
        at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
        at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
        at scala.Option.getOrElse(Option.scala:121)
        at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
        at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:252)
        at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:250)
        at scala.Option.getOrElse(Option.scala:121)
        at org.apache.spark.rdd.RDD.partitions(RDD.scala:250)
        at org.apache.spark.rdd.UnionRDD$$anonfun$1.apply(UnionRDD.scala:84)
        at org.apache.spark.rdd.UnionRDD$$anonfun$1.apply(UnionRDD.scala:84)
        at scala.collection.parallel.AugmentedIterableIterator$class.map2combiner(RemainsIterator.scala:115)
        at scala.collection.parallel.immutable.ParVector$ParVectorIterator.map2combiner(ParVector.scala:62)
        at scala.collection.parallel.ParIterableLike$Map.leaf(ParIterableLike.scala:1054)
        at scala.collection.parallel.Task$$anonfun$tryLeaf$1.apply$mcV$sp(Tasks.scala:49)
        at scala.collection.parallel.Task$$anonfun$tryLeaf$1.apply(Tasks.scala:48)
        at scala.collection.parallel.Task$$anonfun$tryLeaf$1.apply(Tasks.scala:48)
        at scala.collection.parallel.Task$class.tryLeaf(Tasks.scala:51)
        at scala.collection.parallel.ParIterableLike$Map.tryLeaf(ParIterableLike.scala:1051)
        at scala.collection.parallel.AdaptiveWorkStealingTasks$WrappedTask$class.internal(Tasks.scala:169)
        at scala.collection.parallel.AdaptiveWorkStealingForkJoinTasks$WrappedTask.internal(Tasks.scala:443)
        at scala.collection.parallel.AdaptiveWorkStealingTasks$WrappedTask$class.compute(Tasks.scala:149)
        at scala.collection.parallel.AdaptiveWorkStealingForkJoinTasks$WrappedTask.compute(Tasks.scala:443)
        at scala.concurrent.forkjoin.RecursiveAction.exec(RecursiveAction.java:160)
        at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
        at scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
        at scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
        at scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
Caused by: java.util.concurrent.ExecutionException: alluxio.exception.status.UnknownException: Channel [id: 0xd756430f, /10.88.61.73:15934] is closed.
        at java.util.concurrent.FutureTask.report(FutureTask.java:122)
        at java.util.concurrent.FutureTask.get(FutureTask.java:192)
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat.generateSplitsInfo(OrcInputFormat.java:1016)
        ... 35 more
Caused by: alluxio.exception.status.UnknownException: Channel [id: 0xd756430f, /10.88.61.73:15934] is closed.
        at alluxio.exception.status.AlluxioStatusException.fromIOException(AlluxioStatusException.java:275)
        at alluxio.client.file.FileInStream.readInternal(FileInStream.java:236)
        at alluxio.client.file.FileInStream.readCurrentBlockToPos(FileInStream.java:745)
        at alluxio.client.file.FileInStream.seekInternalWithCachingPartiallyReadBlock(FileInStream.java:700)
        at alluxio.client.file.FileInStream.seek(FileInStream.java:320)
        at alluxio.hadoop.HdfsFileInputStream.seek(HdfsFileInputStream.java:159)
        at org.apache.hadoop.fs.FSDataInputStream.seek(FSDataInputStream.java:62)
        at org.apache.hadoop.hive.ql.io.orc.ReaderImpl.extractMetaInfoFromFooter(ReaderImpl.java:367)
        at org.apache.hadoop.hive.ql.io.orc.ReaderImpl.<init>(ReaderImpl.java:316)
        at org.apache.hadoop.hive.ql.io.orc.OrcFile.createReader(OrcFile.java:237)
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat$SplitGenerator.populateAndCacheStripeDetails(OrcInputFormat.java:924)
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat$SplitGenerator.call(OrcInputFormat.java:836)
        at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat$SplitGenerator.call(OrcInputFormat.java:702)
        at java.util.concurrent.FutureTask.run(FutureTask.java:266)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)
Caused by: java.io.IOException: Channel [id: 0xd756430f, /10.88.61.73:15934] is closed.
        at alluxio.client.block.stream.NettyPacketReader$PacketReadHandler.channelUnregistered(NettyPacketReader.java:314)
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelUnregistered(AbstractChannelHandlerContext.java:158)
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelUnregistered(AbstractChannelHandlerContext.java:144)
        at io.netty.channel.ChannelInboundHandlerAdapter.channelUnregistered(ChannelInboundHandlerAdapter.java:53)
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelUnregistered(AbstractChannelHandlerContext.java:158)
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelUnregistered(AbstractChannelHandlerContext.java:144)
        at io.netty.channel.ChannelInboundHandlerAdapter.channelUnregistered(ChannelInboundHandlerAdapter.java:53)
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelUnregistered(AbstractChannelHandlerContext.java:158)
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelUnregistered(AbstractChannelHandlerContext.java:144)
        at io.netty.channel.ChannelInboundHandlerAdapter.channelUnregistered(ChannelInboundHandlerAdapter.java:53)
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelUnregistered(AbstractChannelHandlerContext.java:158)
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelUnregistered(AbstractChannelHandlerContext.java:144)
        at io.netty.channel.ChannelInboundHandlerAdapter.channelUnregistered(ChannelInboundHandlerAdapter.java:53)
        at io.netty.channel.AbstractChannelHandlerContext.invokeChannelUnregistered(AbstractChannelHandlerContext.java:158)
        at io.netty.channel.AbstractChannelHandlerContext.fireChannelUnregistered(AbstractChannelHandlerContext.java:144)
        at io.netty.channel.DefaultChannelPipeline.fireChannelUnregistered(DefaultChannelPipeline.java:739)
        at io.netty.channel.AbstractChannel$AbstractUnsafe$8.run(AbstractChannel.java:659)
        at io.netty.util.concurrent.SingleThreadEventExecutor.runAllTasks(SingleThreadEventExecutor.java:357)
        at io.netty.channel.epoll.EpollEventLoop.run(EpollEventLoop.java:258)
        at io.netty.util.concurrent.SingleThreadEventExecutor$2.run(SingleThreadEventExecutor.java:111)

解决方法：对于Spark Thriftserver，当执行大SQL，driver在getSplit阶段从hdfs读取orc文件的footer信息来计算split，对于大作业这个footer信息非常大导致driver 内存满，而在计算出split之前full gc不会将缓存的footer信息清楚，导致fullgc，进而引发alluxio连接中断。调整参数hive.exec.orc.split.strategy=BI 可以跳过缓存footer信息，从而解决driver端内存压力问题。

4、开启spark 动态资源功能与alluxio结合会报错

1. https://issues.apache.org/jira/browse/SPARK-13232
动态资源在kill掉前边运行的excutor后，再次申请新的excutor时会有资源本地化设置，与现有NodeLabel资源请求限制冲突，导致AM退出；

5、如果spark SQL很大，如误操作没加分区会导致大量加载数据到alluxio，计算非常慢情况，而且thriftserver在job加载数据阶段无法kill作业

6、alluxio使用zookeeper实现HA，执行SQL中导致大数据的SQL出现连接异常

该问题待解决

（完）

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Alluxio 1.6.1 与Spark SQL结合使用踩坑总结

1、扫表问题表不存在hdfs，但在元数据中java.lang.RuntimeException: serious problem at org.apache.hadoop.hive.ql.io.orc.OrcInputFormat.generateSplitsInfo(OrcInputFormat.java:1021) at org.apache.ha...
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