二、ChIA-PET2——1、安装依赖的环境

一、安装ChIA-PET2：

1、下载ChIA-PET2：

https://github.com/GuipengLi/ChIA-PET2

2、安装

tar -zxvf ChIA-PET2-0.9.3.tar.gz
cd /home/fengyongxian/shm/tartar/ChIA-PET2/ChIA-PET2-0.9.3
chmod +x bin/ChIA-PET2
make

二、安装依赖环境

1、安装zlib

[fengyongxian@node01 ~]$ cd /home/fengyongxian/shm/tartar/zlib
[fengyongxian@node01 zlib]$ tar -zxvf zlib-1.2.11.tar.gz
[fengyongxian@node01 zlib]$ cd /home/fengyongxian/shm/tartar/zlib/zlib-1.2.11
[fengyongxian@node01 zlib-1.2.11]$ ./configure
[fengyongxian@node01 zlib-1.2.11]$ make
[fengyongxian@node01 zlib-1.2.11]$ make clean

2、安装Samtools

autoheader            # Build config.h.in (this may generate a warning about
                      # AC_CONFIG_SUBDIRS - please ignore it).
autoconf -Wno-syntax  # Generate the configure script
./configure           # Needed for choosing optional functionality
make
make install

3、安装gcc

yum install gcc

[root@node01 ~]# yum install gcc
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amdgpu-pro-local                                                                    | 2.9 kB  00:00:00     
base                                                                                | 3.6 kB  00:00:00     
epel/x86_64/metalink                                                                | 9.3 kB  00:00:00     
epel                                                                                | 4.7 kB  00:00:00     
extras                                                                              | 2.9 kB  00:00:00     
updates                                                                             | 2.9 kB  00:00:00     
(1/2): epel/x86_64/updateinfo                                                       | 1.0 MB  00:00:00     
(2/2): epel/x86_64/primary_db                                                       | 6.9 MB  0