Solutions1
In an ideal world, you would be using cloud storage, such as Azure Blob Storage, if that's not an option then the way I would do it is create a separate web service that specifically deals with uploaded files and file storage.
By creating a separate web service that manages file storage, you will have isolated your concerns, this service can monitor hard drive storage spaces and balance them out as documents are being uploaded, and in future if you add additional servers... you will already have separated your service so it won't be as big of a mess as it would be if you didn't.
You can index everything in a SQL data store as files are being uploaded. Your issues are actually much more complicated than what I've just mentioned though...
The other issues that need attention is the game plan if or when one of the hard drives go kaput! Without a RAID 1 configuration of your hard drives, your availability plummets to NADA.
Queue issue number 2... availability != backups... You need to consider your game plan on how you intend to back the system up, how often, during what time of day, etc... The more data you have, the more difficult this gets...
This is why everyone is moving over to Azure / AWS etc... you just don't have to worry about these sort of things anymore...
Talk1:
Do you mean there isn't a data center located in your country?
Talk2:
No, i live in Iran , because of sanctions against our country we are not able to use these services :)
Talk3:
Ridiculous! I would have thought the recent lifts in sanctions would permit it... I think you should send an email to Azure sales, they may be accepting iran soon you never know...
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