signature=d771a29c4327a9568cf56903d3720d3c,Abstract 16293: A Whole Blood RNA Signature Accurately Cl...

摘要:

Introduction: Inhibition of non COX1 dependent platelet function (NCDPF) by aspirin (ASA) is variable, with few insights into underlying biology. NCDPF testing is unavailable in most patient care settings. To overcome these barriers, we hypothesized that a whole blood RNA expression profile - a stable biomarker that includes platelet RNA - would correlate with multiple measures of NCDPF on ASA and highlight underlying biological pathways. Methods: Healthy volunteers were treated with 325mg/day ASA. We assessed post-ASA NCDPF by calculating the area under the aggregometry curve (AUC) induced by ADP 10 uM, Epi 10 uM, and collagen 5mg/ml. After 14 days of ASA, we hybridized whole blood RNA to Affymetrix U133 plus 2.0 microarrays. An unsupervised Bayesian sparse factor regression allowed groups of coexpressed genes to be aggregated into 20 "factors". These factors were used in multivariable linear regression to predict platelet function with each agonist. The performance of the predictive model was assessed using leave-one-out cross validation. We used the KEGG pathways database to understand the biological pathways represented by the most correlative factors. Results: Forty volunteers (20 female) completed the study (100% compliant). There was wide variability (median [IQR]) in the AUC induced by ADP (291 [264,308]), Epi (201 [148, 249]), and collagen (214 [178, 242]). The predicted platelet function using the 20 Bayesian factors correlated strongly and significantly with each original measure before and after leave-one-out cross validation. (Table). Factor 6 appeared as a top correlative factor across all agonists (Table). Factor 14 had the strongest (r = 0.5) individual correlation and represented multiple platelet specific genes. Conclusions: Whole blood RNA expression profiling classifies NCDPF on aspirin, reveals a common, pathway underlying the response to multiple agonists, and highlights platelet specific biological factors.

展开

  • 0
    点赞
  • 0
    收藏
    觉得还不错? 一键收藏
  • 0
    评论
评论
添加红包

请填写红包祝福语或标题

红包个数最小为10个

红包金额最低5元

当前余额3.43前往充值 >
需支付:10.00
成就一亿技术人!
领取后你会自动成为博主和红包主的粉丝 规则
hope_wisdom
发出的红包
实付
使用余额支付
点击重新获取
扫码支付
钱包余额 0

抵扣说明:

1.余额是钱包充值的虚拟货币,按照1:1的比例进行支付金额的抵扣。
2.余额无法直接购买下载,可以购买VIP、付费专栏及课程。

余额充值