traininputs matlab,Inputs and targets have different numbers of samples - help needed

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Error using network/train (line 340)

Inputs and targets have different numbers of samples

% Source of Data

filename='wdbc.data';

url=['https://archive.ics.uci.edu/ml/machine-learning-databases/breast-cancer-wisconsin/' filename];

% Read full data table (Use comma, space or tab delimiter depending on data

% source

file_destination = filename;

websave(file_destination,url);

T = readtable(file_destination, 'FileType','text', 'Delimiter', 'comma');

% ------------------------------------------------------------------------

% New Data Set (Mean)

% ------------------------------------------------------------------------

% Analyze Mean Datasets First

inwdbc_data=T(:,3:32);

inpwdbc_data=table2array(inwdbc_data);

outwdbc_data=zeros(size(inwdbc_data,1),3);

% Graphically plot the data as a box plot(Figure 1)

boxplot(inpwdbc_data(:,1:10),1)

title('Compare Mean Attributes Distributions')

xlabel('Cell Nucleus Attribute')

xticklabels({'radius','texture','perimeter','area','smoothness','compactness','concavity','concave pts','symmetry','fractal dimension'})

xtickangle(90)

ylabel('Mean Value')

% Normalize Mean Dataset to help identify and remove outliers (Figure 2)

FP.ymin=0.001; FP.ymax=1;

[Y,PS]=mapminmax(inpwdbc_data',FP);

boxplot(Y',1)

title('Normalized Mean Attributes Distributions')

xlabel('Cell Nucleus Attribute')

xticklabels({'radius','texture','perimeter','area','smoothness','compactness','concavity','concave pts','symmetry','fractal dimension'})

xtickangle(90)

ylabel('Normalised Mean Value')

% There are still quite a number of outliers with the dafault whisker size

% of 1.5 times of IQR. Increasing to a whisker size of 4 reduces the

% outliers and changing plot style allows for better visualisation

% Figure 3

whisk=2;

figure, boxplot(Y','Whisker',whisk,'PlotStyle','compact')

title('Normalised Std Deviation Attributes Distributions')

xlabel('Cell Nucleus Attribute')

xticklabels({'radius','texture','perimeter','area','smoothness','compactness','concavity','concave pts','symmetry','fractal dimension'})

xtickangle(90)

ylabel('Std Deviation Value')

% There are only 3 outliers left in attribute 4 (Area) with the whisker

% size of 4 times IQR.

% Figure 4

y_data=Y;

plot(y_data(:,2))

title('Normalised Mean Attributes Distributions (Reduced Outliers)')

xlabel('Cell Nucleus Attribute')

xticklabels({'radius','texture','perimeter','area','smoothness','compactness','concavity','concave pts','symmetry','fractal dimension'})

xtickangle(90)

ylabel('Mean Value')

%Now to find the instances that contain the outliers. An outlier is

%contained either above the upper whisker (quantile 3 + 4 * (quantile3 -

%quantile 1)) or below the lower whisker (Quantile 1 - 4 * (Quantile3 -

%Quantile 1))

% Find the first quartile (Quantile 1)

Q1 = quantile(y_data(:,2),0.25);

% Find the third quartile (Quantile 3)

Q3 = quantile(y_data(:,2),0.75);

% Find the lower whisker

lowerwhisker = Q1- whisk * (Q3 - Q1);

% Find the upper whisker

upperwhisker = Q3 + whisk * (Q3 - Q1);

meanValue=mean(y_data(:,2));

outliers= (y_data(:,2)>upperwhisker)|(y_data(:,2)

Noutliers=sum(outliers);

% Let us assign NaN (Not a Number) to the outlier(s)

y_data(outliers,2)=NaN;

% Let us plot the data with NaN (Figure 5)

plot(y_data(:,2))

title('Normalised Mean Attributes Distributions (Outliers Removed)')

xlabel('Cell Nucleus Attribute')

xticklabels({'radius','texture','perimeter','area','smoothness','compactness','concavity','concave pts','symmetry','fractal dimension'})

xtickangle(90)

ylabel('Mean Value')

% Now we replace the missing values (NaN), using linear interpolation and

% return the filled vector F and the logical vector TF. The value 1 (true)

% in entries of TF corresponds to the values of F that were filled

[F,TF] = fillmissing(y_data(:,2),'linear',1);

% Now we plot the attribute after filling the missing values (Figure 6)

plot(F)

title('Normalised Mean Attributes Distributions')

xlabel('Cell Nucleus Attribute')

xticklabels({'radius','texture','perimeter','area','smoothness','compactness','concavity','concave pts','symmetry','fractal dimension'})

xtickangle(90)

ylabel('Mean Value')

% Now set the target labels the output target variable outwdbc_data

for i=1:size(inwdbc_data,1)

if (strcmp(table2cell(T(i,2)), 'M'))

outwdbc_data(i,1)=1;

elseif (strcmp(table2cell(T(i,2)), 'B'))

outwdbc_data(i,2)=1;

else

outwdbc_data(i,3)=1;

end

end

% Assign all the attributes including the ones after outliers corrections

% as row vectors to the input patterns 'inputs'

inputs=[y_data(:,1),F,y_data(:,3:10)]';

% Assign the output target variables as row vectors to the output target

% patterns 'targets'

targets=outwdbc_data';

% Now we build a multi-layer perception (MLP) network.

% Let us fix the seed for initializing random number generation, so that

% same values are initialised in the repeated runs.

rng(0)

% Initialise the network

hiddenLayerSize=1;

net = patternnet(hiddenLayerSize, 'trainlm');

% Set up the division of data for training with cross validation

net.divideParam.trainRatio = 70/100;

net.divideParam.valRatio = 15/100;

net.divideParam.testRatio = 15/100;

% Using these settings, the input vectors and target vectors will be

% randomly divided, with 70% used for training, 15% for validation and 15%

% for testing

[net,tr]=train(net,inputs,targets);

outputs = net(inputs);

errors = gsubtract(targets,outputs);

performance = perform(net,targets,outputs);

% view the network diagram

view(net)

% Plot the training, validation and test performance

figure, plotperform(tr)

% Use the plot confusion function to plot the confusion matrix. It shows

% the various types of errors that occurred for the final trained network.

figure, plotconfusion(targets,outputs)