matlab npe,matlab数据降维工具箱

dimensionality reduction and metric learning.

This Matlab toolbox implements 34 techniques for dimensionality reduction and metric learning. These techniques are all available through the COMPUTE_MAPPING function or through the GUI. The following techniques are available:

- Principal Component Analysis ('PCA')

- Linear Discriminant Analysis ('LDA')

- Multidimensional scaling ('MDS')

- Probabilistic PCA ('ProbPCA')

- Factor analysis ('FactorAnalysis')

- Sammon mapping ('Sammon')

- Isomap ('Isomap')

- Landmark Isomap ('LandmarkIsomap')

- Locally Linear Embedding ('LLE')

- Laplacian Eigenmaps ('Laplacian')

- Hessian LLE ('HessianLLE')

- Local Tangent Space Alignment ('LTSA')

- Diffusion maps ('DiffusionMaps')

- Kernel PCA ('KernelPCA')

- Generalized Discriminant Analysis ('KernelLDA')

- Stochastic Neighbor Embedding ('SNE')

- Symmetric Stochastic Neighbor Embedding ('SymSNE')

- t-Distributed Stochastic Neighbor Embedding ('tSNE')

- Neighborhood Preserving Embedding ('NPE')

- Locality Preserving Projection ('LPP')

- Stochastic Proximity Embedding ('SPE')

- Linear Local Tangent Space Alignment ('LLTSA')

- Conformal Eigenmaps ('CCA', implemented as an extension of LLE)

- Maximum Variance Unfolding ('MVU', implemented as an extension of LLE)

- Landmark Maximum Variance Unfolding ('LandmarkMVU')

- Fast Maximum Variance Unfolding ('FastMVU')

- Locally Linear Coordination ('LLC')

- Manifold charting ('ManifoldChart')

- Coordinated Factor Analysis ('CFA')

- Gaussian Process Latent Variable Model ('GPLVM')

- Deep autoencoders ('Autoencoder')

- Neighborhood Components Analysis ('NCA')

- Maximally Collapsing Metric Learning ('MCML')

- Large Margin Nearest Neighhbor metric learning ('LMNN')

Furthermore, the toolbox contains 6 techniques for intrinsic dimensionality estimation. These techniques are available through the function INTRINSIC_DIM. The following techniques are available:

- Eigenvalue-based estimation ('EigValue')

- Maximum Likelihood Estimator ('MLE')

- Estimator based on correlation dimension ('CorrDim')

- Estimator based on nearest neighbor evaluation ('NearNb')

- Estimator based on packing numbers ('PackingNumbers')

- Estimator based on geodesic minimum spanning tree ('GMST')

In addition to these techniques, the toolbox contains functions for prewhitening of data (the function PREWHITEN), exact and estimate out-of-sample extension (the functions OUT_OF_SAMPLE and OUT_OF_SAMPLE_EST), and a function that generates toy datasets (the function GENERATE_DATA).

The graphical user interface of the toolbox is accessible through the DRGUI function.