Mask Rcnn环境搭建并训练自己的数据集（三）

数据集准备：

我们需要的数据集包括原图，以及第二步为每个json生成的文件夹里面的文件。

训练代码：

import os
import sys
import random
import math
import re
import time
import numpy as np
import cv2
import matplotlib
import matplotlib.pyplot as plt
import tensorflow as tf
ROOT_DIR = os.path.abspath("../../")

# Import Mask RCNN
sys.path.append(ROOT_DIR)  # To find local version of the library
from mrcnn.config import Config
#import utils
from mrcnn import model as modellib,utils
from mrcnn import visualize
import yaml
from mrcnn.model import log
from PIL import Image
MODEL_DIR = os.path.join(ROOT_DIR, "logs")

#增加下面声明是为了解决报cudnn错误的问题
import tensorflow as tf
import keras
config = tf.ConfigProto()
config.gpu_options.allow_growth = True
keras.backend.tensorflow_backend.set_session(tf.Session(config=config))

iter_num=0

# Local path to trained weights file
COCO_MODEL_PATH = os.path.join(ROOT_DIR, "mask_rcnn_coco.h5")
# Download COCO trained weights from Releases if needed
if not os.path.exists(COCO_MODEL_PATH):
    utils.download_trained_weights(COCO_MODEL_PATH)

#配置代码
class ShapesConfig(Config):

    # Give the configuration a recognizable name
    NAME = "shapes"

    #这里设置训练GPU的数量以及每个GPU处理图片的数量.
    GPU_COUNT = 1
    IMAGES_PER_GPU = 2

    # 这里设置你的类别
    NUM_CLASSES = 1 + 1  # background + 1 shapes

    # 设置处理的图片大小
    IMAGE_MIN_DIM = 128
    IMAGE_MAX_DIM = 128

    RPN_ANCHOR_SCALES = (8, 16, 32, 64, 128) 

    TRAIN_ROIS_PER_IMAGE = 100

    STEPS_PER_EPOCH = 100
    VALIDATION_STEPS = 50


config = ShapesConfig()
config.display()

def get_ax(rows=1, cols=1, size=8):
    """Return a Matplotlib Axes array to be used in
    all visualizations in the notebook. Provide a
    central point to control graph sizes.

    Change the default size attribute to control the size
    of rendered images
    """
    _, ax = plt.subplots(rows, cols, figsize=(size * cols, size * rows))
    return ax

class DrugDataset(utils.Dataset):
    # 得到该图中有多少个实例（物体）
    def get_obj_index(self, image):
        n = np.max(image)
        return n

    # 解析labelme中得到的yaml文件，从而得到mask每一层对应的实例标签
    def from_yaml_get_class(self, image_id):
        info = self.image_info[image_id]
        with open(info['yaml_path']) as f:
            temp = yaml.load(f.read())
            labels = temp['label_names']
            del labels[0]
        return labels

    # 重新写draw_mask
    def draw_mask(self, num_obj, mask, image,image_id):
        #print("draw_mask-->",image_id)
        #print("self.image_info",self.image_info)
        info = self.image_info[image_id]
        #print("info-->",info)
        #print("info[width]----->",info['width'],"-info[height]--->",info['height'])
        for index in range(num_obj):
            for i in range(info['width']):
                for j in range(info['height']):
                    #print("image_id-->",image_id,"-i--->",i,"-j--->",j)
                    #print("info[width]----->",info['width'],"-info[height]--->",info['height'])
                    at_pixel = image.getpixel((i, j))
                    if at_pixel == index + 1:
                        mask[j, i, index] = 1
        return mask

    # 重新写load_shapes，里面包含自己的类别,可以任意添加
    # 并在self.image_info信息中添加了path、mask_path 、yaml_path
    # yaml_pathdataset_root_path = "/tongue_dateset/"
    # img_floder = dataset_root_path + "rgb"
    # mask_floder = dataset_root_path + "mask"
    # dataset_root_path = "/tongue_dateset/"
    def load_shapes(self, count, img_floder, mask_floder, imglist, dataset_root_path):
        """Generate the requested number of synthetic images.
        count: number of images to generate.
        height, width: the size of the generated images.
        """
        # Add classes,可通过这种方式扩展多个物体
        self.add_class("shapes", 1, "pig") # 黑色素瘤

        for i in range(count):
            # 获取图片宽和高
 
            filestr = imglist[i].split(".")[0]
            #print("id-->", i, " imglist[", i, "]-->", imglist[i],"filestr-->",filestr)
            #filestr = filestr.split(".")[1]
            #mask_path = mask_floder + "/" + filestr + ".png"
            mask_path = dataset_root_path + "labelme_json/" + filestr + "_json/label.png"
            yaml_path = dataset_root_path + "labelme_json/" + filestr + "_json/info.yaml"
            print(dataset_root_path + "labelme_json/" + filestr + "_json/img.png")
            cv_img = cv2.imread(dataset_root_path + "labelme_json/" + filestr + "_json/img.png")
            #width=cv_img.shape[1]
            #print(width)
            self.add_image("shapes", image_id=i, path=img_floder + "/" + imglist[i],
                           width=cv_img.shape[1], height=cv_img.shape[0], mask_path=mask_path, yaml_path=yaml_path)

    # 重写load_mask
    def load_mask(self, image_id):
        """Generate instance masks for shapes of the given image ID.
        """
        global iter_num
        #print("image_id",image_id)
        info = self.image_info[image_id]
        #print(info['mask_path'])
        count = 1  # number of object
        img = Image.open(info['mask_path'])
        num_obj = self.get_obj_index(img)
        mask = np.zeros([info['height'], info['width'], num_obj], dtype=np.uint8)
        mask = self.draw_mask(num_obj, mask, img,image_id)
        occlusion = np.logical_not(mask[:, :, -1]).astype(np.uint8)
        for i in range(count - 2, -1, -1):
            mask[:, :, i] = mask[:, :, i] * occlusion

            occlusion = np.logical_and(occlusion, np.logical_not(mask[:, :, i]))
        labels = []
        labels = self.from_yaml_get_class(image_id)
        labels_form = []
        for i in range(len(labels)):
            if labels[i].find("pig") != -1:
                # print "box"
                labels_form.append("pig")
        class_ids = np.array([self.class_names.index(s) for s in labels_form])
        return mask, class_ids.astype(np.int32)

#基础设置
dataset_root_path="json1/"
img_floder = dataset_root_path + "pic"    #原始图片的位置
mask_floder = dataset_root_path + "labelme_json"   #步骤二，json转换之后文件夹
#yaml_floder = dataset_root_path
imglist = os.listdir(img_floder)
count = len(imglist)

#train与val数据集准备
dataset_train = DrugDataset()
dataset_train.load_shapes(count, img_floder, mask_floder, imglist,dataset_root_path)
dataset_train.prepare()

#print("dataset_train-->",dataset_train._image_ids)
dataset_val = DrugDataset()
dataset_val.load_shapes(10, img_floder, mask_floder, imglist,dataset_root_path)
dataset_val.prepare()

print("dataset_val-->",dataset_val._image_ids)

#初始化模型和参数

# Create model in training mode
model = modellib.MaskRCNN(mode="training", config=config,
                          model_dir=MODEL_DIR)

init_with = "coco"  # imagenet, coco, or last

if init_with == "imagenet":
    model.load_weights(model.get_imagenet_weights(), by_name=True)
elif init_with == "coco":
    model.load_weights(COCO_MODEL_PATH, by_name=True,
                       exclude=["mrcnn_class_logits", "mrcnn_bbox_fc",
                                "mrcnn_bbox", "mrcnn_mask"])
elif init_with == "last":
    # Load the last model you trained and continue training
    model.load_weights(model.find_last()[1], by_name=True)

#开始训练，训练的模型都会存放在logs文件夹里面
import warnings
warnings.filterwarnings('ignore')
model.train(dataset_train, dataset_val,
            learning_rate=config.LEARNING_RATE,
            epochs=100,
            layers='heads')

model.train(dataset_train, dataset_val,
            learning_rate=config.LEARNING_RATE/10,
            epochs=150,
            layers='all')

测试代码：

import os
import sys
import random
import math
import numpy as np
import skimage.io
import matplotlib
import matplotlib.pyplot as plt
import cv2
import time
from mrcnn.config import Config
from datetime import datetime 
# Root directory of the project
ROOT_DIR = os.getcwd()

# Import Mask RCNN
sys.path.append(ROOT_DIR)  # To find local version of the library
from mrcnn import utils
import mrcnn.model as modellib
from mrcnn import visualize
# Import COCO config
sys.path.append(os.path.join(ROOT_DIR, "samples/coco/"))  # To find local version
from samples.coco import coco


# Directory to save logs and trained model
MODEL_DIR = os.path.join(ROOT_DIR, "logs")

# Local path to trained weights file
COCO_MODEL_PATH = os.path.join(MODEL_DIR ,"mask_rcnn_shapes_0300.h5")
# Download COCO trained weights from Releases if needed
if not os.path.exists(COCO_MODEL_PATH):
    utils.download_trained_weights(COCO_MODEL_PATH)
    print("cuiwei***********************")

# Directory of images to run detection on
IMAGE_DIR = os.path.join(ROOT_DIR, "images")

class ShapesConfig(Config):
    """Configuration for training on the toy shapes dataset.
    Derives from the base Config class and overrides values specific
    to the toy shapes dataset.
    """
    # Give the configuration a recognizable name
    NAME = "shapes"

    # Train on 1 GPU and 8 images per GPU. We can put multiple images on each
    # GPU because the images are small. Batch size is 8 (GPUs * images/GPU).
    GPU_COUNT = 1
    IMAGES_PER_GPU = 1

    # Number of classes (including background)
    NUM_CLASSES = 1 + 1  # background + 3 shapes

    # Use small images for faster training. Set the limits of the small side
    # the large side, and that determines the image shape.
    IMAGE_MIN_DIM = 128
    IMAGE_MAX_DIM = 128

    # Use smaller anchors because our image and objects are small
    RPN_ANCHOR_SCALES = (8, 16, 32, 64, 128)  # anchor side in pixels

    # Reduce training ROIs per image because the images are small and have
    # few objects. Aim to allow ROI sampling to pick 33% positive ROIs.
    TRAIN_ROIS_PER_IMAGE =100

    # Use a small epoch since the data is simple
    STEPS_PER_EPOCH = 100

    # use small validation steps since the epoch is small
    VALIDATION_STEPS = 50

#import train_tongue
#class InferenceConfig(coco.CocoConfig):
class InferenceConfig(ShapesConfig):
    # Set batch size to 1 since we'll be running inference on
    # one image at a time. Batch size = GPU_COUNT * IMAGES_PER_GPU
    GPU_COUNT = 1
    IMAGES_PER_GPU = 1

config = InferenceConfig()

model = modellib.MaskRCNN(mode="inference", model_dir=MODEL_DIR, config=config)


# Create model object in inference mode.
model = modellib.MaskRCNN(mode="inference", model_dir=MODEL_DIR, config=config)

# Load weights trained on MS-COCO
model.load_weights(COCO_MODEL_PATH, by_name=True)

# COCO Class names
# Index of the class in the list is its ID. For example, to get ID of
# the teddy bear class, use: class_names.index('teddy bear')
class_names = ['BG', 'pig','pig','pig','pig','pig','pig','pig']
# Load a random image from the images folder
#file_names = next(os.walk(IMAGE_DIR))[2]
image = skimage.io.imread('/home/uc/Mask_RCNN-master/images/123.jpg')

a=datetime.now() 
# Run detection
results = model.detect([image], verbose=1)
b=datetime.now() 
# Visualize results
print("shijian",(b-a).seconds)
r = results[0]
visualize.display_instances(image, r['rois'], r['masks'], r['class_ids'], 
                            class_names, r['scores'])