RNASeq
student_zero
这个作者很懒,什么都没留下…
展开
-
fastqc_presentation_ppt
fastqc_presentation转载 2016-01-27 14:11:14 · 243 阅读 · 0 评论 -
RNA-seq Data Analysis-A Practical Approach-book(2015) 笔记
1 because nothing beats the human eye in detecting interesting patterns in the data 1072 tophat2 default phred+33 illumina 1.9 is +333.原创 2016-01-27 21:30:50 · 1173 阅读 · 0 评论 -
get rRNA.gtf
从GTF文件中取出想要的特殊类型的gtf文件example:ensembl$ grep -w 'rRNA\|Mt_tRNA\|MT' Mus_musculus.GRCm38.75.gtf > mask_file.gtfOR$ egrep -wi 'rRNA|Mt_tRNA|MT' Mus_musculus.GRCm38.75.gtf > mask_file.gtf原创 2016-01-31 18:40:39 · 834 阅读 · 1 评论 -
从UCSC获得gtf文件
How to get tRNA/rRNA/mitochondrial gene GTF fileCufflinks/Tophat ask for a GTF file to mask the abundant transcripts (e.g. tRNA/rRNA/chrM). Here is the step to get such a file:Go to UC转载 2016-01-31 18:43:08 · 4844 阅读 · 1 评论