机器学习模型保存mysql_计算化学领域有哪些著名的数据库,可用于机器学习的模型训练?...

本文列举了一系列用于虚拟筛选和机器学习模型训练的著名化学数据库,包括GDB系列数据库、Open Babel等,这些资源含有丰富的分子结构、性质数据。同时,文章提及了使用机器学习方法进行分子原子化能量预测、量子化学计算以及开发精确的势能面模型的研究,强调了这些技术在模拟化学反应和材料性能预测中的潜力。
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^Virtual Exploration of the Chemical Universe up to 11 Atoms of C, N, O, F:  Assembly of 26.4 Million Structures (110.9 Million Stereoisomers) and Analysis for New Ring Systems, Stereochemistry, Physicochemical Properties, Compound Classes, and Drug Discovery https://doi.org/10.1021/ci600423u

^970 Million Druglike Small Molecules for Virtual Screening in the Chemical Universe Database GDB-13 https://doi.org/10.1021/ja902302h

^Enumeration of 166 billion organic small molecules in the chemical universe database GDB-17 https://doi.org/10.1021/ci300415d

^Fast, efficient fragment-based coordinate generation for Open Babel https://doi.org/10.1186/s13321-019-0372-5

^Fast and Accurate Modeling of Molecular Atomization Energies with Machine Learning https://doi.org/10.1103/PhysRevLett.108.058301

^Quantum chemistry structures and properties of 134 kilo molecules https://doi.org/10.1038/sdata.2014.22

^Fast and Accurate Modeling of Molecular Atomization Energies with Machine Learning https://doi.org/10.1103/PhysRevLett.108.058301

^Assessment and Validation of Machine Learning Methods for Predicting Molecular Atomization Energies https://doi.org/10.1021/ct400195d

^Atomic Energies from a Convolutional Neural Network https://doi.org/10.1021/acs.jctc.8b00149

^A reactive, scalable, and transferable model for molecular energies from a neural network approach based on local information https://doi.org/10.1063/1.5017898

^SchNet: A continuous-filter convolutional neural network for modeling quantum interactions https://papers.nips.cc/paper/2017/hash/303ed4c69846ab36c2904d3ba8573050-Abstract.html

^Machine learning of accurate energy-conserving molecular force fields https://doi.org/10.1126/sciadv.1603015

^End-to-end Symmetry Preserving Inter-atomic Potential Energy Model for Finite and Extended Systems https://proceedings.neurips.cc/paper/2018/hash/e2ad76f2326fbc6b56a45a56c59fafdb-Abstract.html

^ANI-1, A data set of 20 million calculated off-equilibrium conformations for organic molecules https://doi.org/10.1038/sdata.2017.193

^Less is more: Sampling chemical space with active learning https://doi.org/10.1063/1.5023802

^Approaching coupled cluster accuracy with a general-purpose neural network potential through transfer learning https://doi.org/10.1038/s41467-019-10827-4

^The ANI-1ccx and ANI-1x data sets, coupled-cluster and density functional theory properties for molecules https://doi.org/10.1038/s41597-020-0473-z

^Deep Potential Molecular Dynamics: A Scalable Model with the Accuracy of Quantum Mechanics https://doi.org/10.1103/PhysRevLett.120.143001

^Active learning of uniformly accurate interatomic potentials for materials simulation https://doi.org/10.1103/PhysRevMaterials.3.023804

^DP-GEN: A concurrent learning platform for the generation of reliable deep learning based potential energy models https://doi.org/10.1016/j.cpc.2020.107206

^Accurate Deep Potential model for the Al-Cu-Mg alloy in the full concentration space https://arxiv.org/abs/2008.11795

^Deep-learning interatomic potential for irradiation damage simulations in MoS2 with ab initial accuracy https://arxiv.org/abs/2010.09547

^Signatures of a liquid–liquid transition in an ab initio deep neural network model for water https://doi.org/10.1073/pnas.2015440117

^Complex reaction processes in combustion unraveled by neural network-based molecular dynamics simulation https://doi.org/10.1038/s41467-020-19497-z

^Explore the Chemical Space of Linear Alkanes Pyrolysis via Deep Potential Generator https://doi.org/10.26434/chemrxiv.12935261

^Using metadynamics to build neural network potentials for reactive events: the case of urea decomposition in water https://arxiv.org/abs/2011.11455

^Theoretical study of Na+ transport in the solid-state electrolyte Na3OBr based on deep potential molecular dynamics https://doi.org/10.1039/D0QI00921K

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