执行mysql_install_db error 1005 报错 can't create table 'db' (errno 13)

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[root@server ~] # /usr/local/mysql/scripts/mysql_install_db  --basedir=/usr/local/mysql/  --datadir=/data/ Installing MySQL system tables...2013-05-19 10:42:24 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation  for  more  details). 2013-05-19 10:42:24 2007 [Note] InnoDB: The InnoDB memory heap is disabled 2013-05-19 10:42:24 2007 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins 2013-05-19 10:42:24 2007 [Note] InnoDB: Compressed tables use zlib 1.2.3 2013-05-19 10:42:24 2007 [Note] InnoDB: Not using CPU crc32 instructions 2013-05-19 10:42:24 2007 [Note] InnoDB: Initializing buffer pool, size = 128.0M 2013-05-19 10:42:24 2007 [Note] InnoDB: Completed initialization of buffer pool 2013-05-19 10:42:24 2007 [Note] InnoDB: Highest supported  file  format  is Barracuda. 2013-05-19 10:42:24 2007 [Note] InnoDB: 128 rollback segment(s) are active. 2013-05-19 10:42:24 2007 [Note] InnoDB: Waiting  for  purge to start 2013-05-19 10:42:24 2007 [Note] InnoDB: 5.6.11 started; log sequence number 1600607 ERROR: 1005  Can 't create table ' db' (errno: 13) 2013-05-19 10:42:24 2007 [ERROR] Aborting 2013-05-19 10:42:24 2007 [Note] Binlog end 2013-05-19 10:42:24 2007 [Note] InnoDB: FTS optimize thread exiting. 2013-05-19 10:42:24 2007 [Note] InnoDB: Starting  shutdown ... 2013-05-19 10:42:25 2007 [Note] InnoDB: Shutdown completed; log sequence number 1600617 2013-05-19 10:42:25 2007 [Note]  /usr/local/mysql//bin/mysqld : Shutdown complete

解决方法：

将系统/etc/下默认的my.cnf 替换成mysql数据包中的配置文件

1	[root@server ~] # cp /usr/local/mysql/support-files/my-default.cnf   /etc/my.cnf

再次执行：

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[root@server ~] # /usr/local/mysql/scripts/mysql_install_db  --basedir=/usr/local/mysql/  --datadir=/data/  --user=mysql Installing MySQL system tables...2013-05-19 10:52:57 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation  for  more  details). 2013-05-19 10:52:57 2180 [Note] InnoDB: The InnoDB memory heap is disabled 2013-05-19 10:52:57 2180 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins 2013-05-19 10:52:57 2180 [Note] InnoDB: Compressed tables use zlib 1.2.3 2013-05-19 10:52:57 2180 [Note] InnoDB: Not using CPU crc32 instructions 2013-05-19 10:52:57 2180 [Note] InnoDB: Initializing buffer pool, size = 128.0M 2013-05-19 10:52:57 2180 [Note] InnoDB: Completed initialization of buffer pool 2013-05-19 10:52:57 2180 [Note] InnoDB: The first specified data  file  . /ibdata1  did not exist: a new database to be created! 2013-05-19 10:52:57 2180 [Note] InnoDB: Setting  file  . /ibdata1  size to 12 MB 2013-05-19 10:52:57 2180 [Note] InnoDB: Database physically writes the  file  full: wait... 2013-05-19 10:52:58 2180 [Note] InnoDB: Setting log  file  . /ib_logfile101  size to 48 MB 2013-05-19 10:52:59 2180 [Note] InnoDB: Setting log  file  . /ib_logfile1  size to 48 MB 2013-05-19 10:53:00 2180 [Note] InnoDB: Renaming log  file  . /ib_logfile101  to . /ib_logfile0 2013-05-19 10:53:00 2180 [Warning] InnoDB: New log files created, LSN=45781 2013-05-19 10:53:00 2180 [Note] InnoDB: Doublewrite buffer not found: creating new 2013-05-19 10:53:00 2180 [Note] InnoDB: Doublewrite buffer created 2013-05-19 10:53:00 2180 [Note] InnoDB: 128 rollback segment(s) are active. 2013-05-19 10:53:00 2180 [Warning] InnoDB: Creating foreign key constraint system tables. 2013-05-19 10:53:00 2180 [Note] InnoDB: Foreign key constraint system tables created 2013-05-19 10:53:00 2180 [Note] InnoDB: Creating tablespace and datafile system tables. 2013-05-19 10:53:00 2180 [Note] InnoDB: Tablespace and datafile system tables created. 2013-05-19 10:53:00 2180 [Note] InnoDB: Waiting  for  purge to start 2013-05-19 10:53:00 2180 [Note] InnoDB: 5.6.11 started; log sequence number 0 2013-05-19 10:53:05 2180 [Note] Binlog end 2013-05-19 10:53:05 2180 [Note] InnoDB: FTS optimize thread exiting. 2013-05-19 10:53:05 2180 [Note] InnoDB: Starting  shutdown ... 2013-05-19 10:53:07 2180 [Note] InnoDB: Shutdown completed; log sequence number 1625977 OK Filling help tables...2013-05-19 10:53:07 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation  for  more  details). 2013-05-19 10:53:07 2203 [Note] InnoDB: The InnoDB memory heap is disabled 2013-05-19 10:53:07 2203 [Note] InnoDB: Mutexes and rw_locks use GCC atomic builtins 2013-05-19 10:53:07 2203 [Note] InnoDB: Compressed tables use zlib 1.2.3 2013-05-19 10:53:07 2203 [Note] InnoDB: Not using CPU crc32 instructions 2013-05-19 10:53:07 2203 [Note] InnoDB: Initializing buffer pool, size = 128.0M 2013-05-19 10:53:07 2203 [Note] InnoDB: Completed initialization of buffer pool 2013-05-19 10:53:07 2203 [Note] InnoDB: Highest supported  file  format  is Barracuda. 2013-05-19 10:53:07 2203 [Note] InnoDB: 128 rollback segment(s) are active. 2013-05-19 10:53:07 2203 [Note] InnoDB: Waiting  for  purge to start 2013-05-19 10:53:07 2203 [Note] InnoDB: 5.6.11 started; log sequence number 1625977 2013-05-19 10:53:07 2203 [Note] Binlog end 2013-05-19 10:53:07 2203 [Note] InnoDB: FTS optimize thread exiting. 2013-05-19 10:53:07 2203 [Note] InnoDB: Starting  shutdown ... 2013-05-19 10:53:09 2203 [Note] InnoDB: Shutdown completed; log sequence number 1625987 OK To start mysqld at boot  time  you have to copy support-files /mysql .server to the right place  for  your system PLEASE REMEMBER TO SET A PASSWORD FOR THE MySQL root USER ! To  do  so, start the server,  then  issue the following commands:    /usr/local/mysql//bin/mysqladmin  -u root password  'new-password'    /usr/local/mysql//bin/mysqladmin  -u root -h server.clovem.com password  'new-password' Alternatively you can run:    /usr/local/mysql//bin/mysql_secure_installation which  will also give you the option of removing the  test databases and anonymous user created by default.  This is strongly recommended  for  production servers. See the manual  for  more  instructions. You can start the MySQL daemon with:    cd  . ;  /usr/local/mysql//bin/mysqld_safe  & You can  test  the MySQL daemon with mysql- test -run.pl    cd  mysql- test  ; perl mysql- test -run.pl Please report any problems with the . /bin/mysqlbug  script! The latest information about MySQL is available on the web at    http: //www .mysql.com Support MySQL by buying support /licenses  at http: //shop .mysql.com WARNING: Found existing config  file  /usr/local/mysql//my .cnf on the system. Because this  file  might be  in  use, it was not replaced, but was used  in  bootstrap (unless you used --defaults- file ) and when you later start the server. The new default config  file  was created as  /usr/local/mysql//my-new .cnf, please compare it with your  file  and take the changes you need. WARNING: Default config  file  /etc/my .cnf exists on the system This  file  will be  read  by default by the MySQL server If you  do  not want to use this, either remove it, or use the --defaults- file  argument to mysqld_safe when starting the server

查看数据目录中的文件：

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[root@server ~] # ls /data/ -l total 110604 -rw-rw----. 1 mysql mysql 12582912 May 19 10:53 ibdata1 -rw-rw----. 1 mysql mysql 50331648 May 19 10:53 ib_logfile0 -rw-rw----. 1 mysql mysql 50331648 May 19 10:52 ib_logfile1 drwx------. 2 mysql mysql     4096 May 19 10:53 mysql drwx------. 2 mysql mysql     4096 May 19 10:53 performance_schema drwx------. 2 mysql mysql     4096 May 19 10:52  test

本文转自 暗黑魔君 51CTO博客，原文链接：http://blog.51cto.com/clovemfong/1203910，如需转载请自行联系原作者