python extension package_Windows Python Extension Packages

AIDA implements the Adaptive Image Deconvolution Algorithm.

Alglib, a cross-platform numerical analysis and data processing library.

Babel, tools for internationalizing Python applications.

BALLView, a molecular modeling and visualization application.

Bioformats read and write life sciences file formats using Bio-Formats.

Requires javabridge.

Biogeme performs estimation of discrete choice models.

BioImageXD is software for analysis and visualization of multidimensional biomedical images.

BisQue (Bio-Image Semantic Query User Environment), store, visualize, organize and analyze images in the cloud.

Blaze translates NumPy/Pandas-like syntax to systems like databases.

Bokeh, an implementation of the Grammar of Graphics for output to the HTML5 Canvas.

Requires many dependencies.

CasADi implements automatic differentiation in forward and adjoint modes.

Certifi provides Mozilla's CA Bundle.

Coloc_utils computes colocalization coefficients from confocal images.

Cryptography exposes cryptographic primitives and recipes.

CVXPY, a modeling language for convex optimization problems.

Requires numpy+mkl, scipy, cvxopt, scs, and ecos.

DeVIDE, a dataflow application builder for the rapid prototyping of medical visualization and image processing techniques.

Django, a high-level Web framework.

Docutils processes plaintext documentation into HTML, LaTeX, man-pages, open-document or XML.

Dpmix, a library for fitting massive mixture models.

EMAN2, a greyscale scientific image processing suite with a focus on transmission electron microscopy. Supports many image formats.

Epydoc, a tool for generating module API documentation.

FARSIGHT, a toolkit for microscopy image analysis based using Bio-Formats.

FiPy, a finite volume PDE solver.

Requires pysparse.

Flask, a microframework based on Werkzeug, Jinja2 and good intentions.

Gexiv2, a GObject-based wrapper around the exiv2 library for image metadata.

GHMM, the General Hidden Markov Model library.

Graph-tool, an efficient module for manipulation and statistical analysis of graphs.

Ilastik, an interactive learning and segmentation toolkit.

IPython, an interactive computing environment.

IPython 4 requires Jupyter.

Some functions require setuptools, pyzmq, tornado, pygments, markupsafe, jinja2, mistune, rpy2, pycairo, matplotlib, pyqt4 or pyside, pandoc, and whatnot.

Iris, a library for analysing and visualising meteorological and oceanographic data sets

Requires scipy, netcdf4-python, cartopy, shapely, udunits2 and other dependencies.

ITK (Insight Segmentation and Registration Toolkit), a software system for image analysis.

Jupyter, an interactive computing environment.

Some functions require setuptools, ipython4, pyzmq, tornado, pygments, markupsafe, jinja2, mistune, rpy2, pycairo, matplotlib, pyqt4 or pyside, pandoc, and whatnot.

Lmfit, a least-squares minimization with constraints.

M2Crypto, a complete wrapper for OpenSSL.

Mako, a fast templating language.

Mantid, a framework that supports high-performance computing and visualization of scientific data.

MathGL, a library for scientific data visualization.

MDP, the Modular toolkit for Data Processing.

mMass, an mass spectrometry tool.

MMCorePy allows to control microscope hardware via Micro-Manager.

Msim, superresolution fluorescence microscopy of multicellular organisms.

Ncrypt is yet another OpenSSL wrapper.

NetworkX, a package for complex networks.

NiBabel, access a cacophony of neuro-imaging file formats.

Nipype, workflows and interfaces for neuroimaging packages.

NLTK, the Natural Language Toolkit.

Requires pyyaml.

Nodebox-GL, a library for generating 2D animations.

Nose extends unittest to make testing easier.

Numeric is deprecated, superseded by Numpy.

OpenGLContext, a testing and learning environment for PyOpenGL.

OpenKinect provides access to the Xbox Kinect device.

Requires LibUSB 1.2.6.

OpenMDAO, a Multidisciplinary Design Analysis and Optimization (MDAO) framework.

OpenSlide reads whole-slide images, high resolution images exceeding RAM sizes.

Panda3D, a framework for 3D rendering and game development.

ParticleStats performs analysis of intracellular particle motility and cytoskeletal polarity.

Patsy, a package for describing statistical models and for building design matrices.

Peak_detection implements the Gaussian peak detection described in Segré et al.

Pims, Python Image Sequence, loads video and sequential images.

Pip is the recommended tool for installing Python packages.

Pip and setuptools are included with Python >=3.4 and >=2.7.9.

To bootstrap pip on installations without pip, use the get-pip.py script or run

python.exe pip-7.1.2-py2.py3-none-any.whl/pip install pip-7.1.2-py2.py3-none-any.whl.

Pmw, a toolkit for building high-level compound widgets using the Tkinter module.

PolyVox, a library for the storage and processing of volumetric environments.

Priithon, a platform for image analysis and algorithm development.

Includes HIS, SDT, SIF, and SPE file readers.

PsychoPy, software for psychology and neuroscience.

Py-bcrypt, a wrapper of OpenBSD's Blowfish password hashing code.

PyAudiere, a high-level audio interface using the Audiere sound library.

pyCGNS provides an interface to the CGNS/SIDS data model.

Pycparser, a complete parser for the C language.

PyCrypto provides cryptographic modules.

PyDSTool, a dynamical systems modeling, simulation and analysis environment.

Pyffmpeg, a wrapper for FFmpeg, a solution to record, convert and stream audio and video.

PyFFTW3 are bindings to the FFTW C library.

Pyglet, a cross-platform windowing and multimedia library using AVbin.

Pygments, a generic syntax highlighter.

PyGreSQL interfaces to a PostgreSQL database.

Pygrib, a module for reading GRIB meteorological files.

PyGst, bindings for the GStreamer multimedia framework.

Pykit, a backend compiler for high-level typed code.

PyME,

the Python Microscopy Environment, provides image acquisition and data

analysis functionality for widefield microscopy applications.

Pymex embeds Python in a MATLAB(tm) 2011b extension module.

pyNFFT, a wrapper around the NFFT library.

PyNIfTI provides access to NIfTI and ANALYZE files.

Pyo, a digital signal processing module.

PyODE, a set of bindings for the Open Dynamics Engine.

pyOpenSSL, an interface to the OpenSSL library.

Pyparsing creates and executes simple grammars.

PyQt5, a set of bindings for the Qt5 application framework.

PyReadline (unstable, deprecated), a ctypes-based readline for Windows.

Pysam, a module for reading and manipulating SAM nucleotide sequence alignment files.

PySerial encapsulates the access for the serial port.

Pysifreader reads Andor SIF multi-channel image files.

PySUNDIALS provides bindings for the SUNDIALS suite of solvers.

PySVN interfaces the Subversion version control system.

Python-Dateutil extends the standard datetime module.

Requires six.

Python-Ogre, an interface to the Ogre 3D graphics library.

Pythonisosurfaces, a marching cubes iso-surface implementation.

PythonOCC, a 3D CAD/CAE/PLM development framework.

PythonQwt, Qt plotting widgets.

Requires pyqt4.

Pytools, a collection of tools.

Requires six, decorator and appdirs.

Pytz provides world timezone definitions, modern and historical.

PyVISA, bindings to the "Virtual Instrument Software Architecture" VISA library.

Requests, a HTTP library for human beings.

RootPy provides an interface with the ROOT data analysis framework on top of PyROOT.

Scikit-bio (unstable) provides data structures, algorithms, and educational resources for bioinformatics.

Scikit-tracker, objects detection and robust tracking for cell biology.

SciTools are useful tools for scientific computing.

SCons, a software construction tool.

Setuptools downloads, builds, installs, upgrades, and uninstalls Python packages.

Sherpa, a modeling and fitting application.

Simpleaudio, simple audio playback.

SimpleCV, a framework for building computer vision applications.

Six, a Python 2 and 3 compatibility library.

SMC.FreeImage, a wrapper for the FreeImage library.

SpacePy tools for the space science community.

Spyder, the Scientific PYthon Development EnviRonment.

Requires guiqwt and other dependencies.

Stdic computes a deformation function between images (image registration).

STScI_python provides a general astronomical data analysis infrastructure.

Sympy, a library for symbolic mathematics.

Trackpy, tools for particle tracking.

Trfit fits time-resolved fluorescence decays.

VIPS, an image processing library with no image size limits.

Virtualenv, a virtual Python environment builder.

VisionEgg produces stimuli for vision research experiments.

Vispy, OpenGL-based interactive visualization.

Visvis, a library for visualization of 1D to 4D data in an object oriented way.

ViTables, a GUI for browsing and editing files in PyTables and HDF5 formats.

WFastCGI provides a gateway between IIS's FastCGI support to Python's WSGI protocol.

Xray, N-D labeled arrays and datasets.

ZODB, the Zope Object Database, provides an object-oriented database.