FAIndividual.py
import numpy as np
import ObjFunction
class FAIndividual:
'''
individual of firefly algorithm
'''
def __init__(self, vardim, bound):
'''
vardim: dimension of variables
bound: boundaries of variables
'''
self.vardim = vardim
self.bound = bound
self.fitness = 0.
self.trials = 0
def generate(self):
'''
generate a random chromsome for firefly algorithm
'''
len = self.vardim
rnd = np.random.random(size=len)
self.chrom = np.zeros(len)
for i in xrange(0, len):
self.chrom[i] = self.bound[0, i] + \
(self.bound[1, i] - self.bound[0, i]) * rnd[i]
def calculateFitness(self):
'''
calculate the fitness of the chromsome
'''
self.fitness = ObjFunction.GrieFunc(
self.vardim, self.chrom, self.bound)
FA.py
import numpy as np
from FAIndividual import FAIndividual
import random
import copy
import matplotlib.pyplot as plt
class FireflyAlgorithm:
'''
The class for firefly algorithm
'''
def __init__(self, sizepop, vardim, bound, MAXGEN, params):
'''
sizepop: population sizepop
vardim: dimension of variables
bound: boundaries of variables
MAXGEN: termination condition
param: algorithm required parameters, it is a list which is consisting of [beta0, gamma, alpha]
'''
self.sizepop = sizepop
self.MAXGEN = MAXGEN
self.vardim = vardim
self.bound = bound
self.population = []
self.fitness = np.zeros((self.sizepop, 1))
self.trace = np.zeros((self.MAXGEN, 2))
self.params = params
def initialize(self):
'''
initialize the population
'''
for i in xrange(0, self.sizepop):
ind = FAIndividual(self.vardim, self.bound)
ind.generate()
self.population.append(ind)
def evaluate(self):
'''
evaluation of the population fitnesses
'''
for i in xrange(0, self.sizepop):
self.population[i].calculateFitness()
self.fitness[i] = self.population[i].fitness
def solve(self):
'''
evolution process of firefly algorithm
'''
self.t = 0
self.initialize()
self.evaluate()
best = np.max(self.fitness)
bestIndex = np.argmax(self.fitness)
self.best = copy.deepcopy(self.population[bestIndex])
self.avefitness = np.mean(self.fitness)
self.trace[self.t, 0] = (1 - self.best.fitness) / self.best.fitness
self.trace[self.t, 1] = (1 - self.avefitness) / self.avefitness
print("Generation %d: optimal function value is: %f; average function value is %f" % (
self.t, self.trace[self.t, 0], self.trace[self.t, 1]))
while (self.t < self.MAXGEN - 1):
self.t += 1
self.move()
self.evaluate()
best = np.max(self.fitness)
bestIndex = np.argmax(self.fitness)
if best > self.best.fitness:
self.best = copy.deepcopy(self.population[bestIndex])
self.avefitness = np.mean(self.fitness)
self.trace[self.t, 0] = (1 - self.best.fitness) / self.best.fitness
self.trace[self.t, 1] = (1 - self.avefitness) / self.avefitness
print("Generation %d: optimal function value is: %f; average function value is %f" % (
self.t, self.trace[self.t, 0], self.trace[self.t, 1]))
print("Optimal function value is: %f; " %
self.trace[self.t, 0])
print "Optimal solution is:"
print self.best.chrom
self.printResult()
def move(self):
'''
move the a firefly to another brighter firefly
'''
for i in xrange(0, self.sizepop):
for j in xrange(0, self.sizepop):
if self.fitness[j] > self.fitness[i]:
r = np.linalg.norm(
self.population[i].chrom - self.population[j].chrom)
beta = self.params[0] * \
np.exp(-1 * self.params[1] * (r ** 2))
# beta = 1 / (1 + self.params[1] * r)
# print beta
self.population[i].chrom += beta * (self.population[j].chrom - self.population[
i].chrom) + self.params[2] * np.random.uniform(low=-1, high=1, size=self.vardim)
for k in xrange(0, self.vardim):
if self.population[i].chrom[k] < self.bound[0, k]:
self.population[i].chrom[k] = self.bound[0, k]
if self.population[i].chrom[k] > self.bound[1, k]:
self.population[i].chrom[k] = self.bound[1, k]
self.population[i].calculateFitness()
self.fitness[i] = self.population[i].fitness
def printResult(self):
'''
plot the result of the firefly algorithm
'''
x = np.arange(0, self.MAXGEN)
y1 = self.trace[:, 0]
y2 = self.trace[:, 1]
plt.plot(x, y1, 'r', label='optimal value')
plt.plot(x, y2, 'g', label='average value')
plt.xlabel("Iteration")
plt.ylabel("function value")
plt.title("Firefly Algorithm for function optimization")
plt.legend()
plt.show()
运行程序:
if __name__ == "__main__":
bound = np.tile([[-600], [600]], 25)
fa = FA(60, 25, bound, 200, [1.0, 0.000001, 0.6])
fa.solve()
pageRank算法 python实现
一.什么是pagerank PageRank的Page可是认为是网页,表示网页排名,也可以认为是Larry Page(google 产品经理),因为他是这个算法的发明者之一,还是google CEO( ...
常见排序算法-Python实现
常见排序算法-Python实现 python 排序 算法 1.二分法 python 32行 right = length- : ] ): test_list = [,,,,,, ...
kmp算法python实现
kmp算法python实现 kmp算法 kmp算法用于字符串的模式匹配,也就是找到模式字符串在目标字符串的第一次出现的位置比如abababc那么bab在其位置1处,bc在其位置5处我们首先想到的最简单 ...
KMP算法-Python版
KMP算法-Python版 传统法: 从左到右一个个匹配,如果这个过程中有某个字符不匹配,就跳回去,将模式串向右移动一位.这有什么难的? 我们可以 ...
压缩感知重构算法之IRLS算法python实现
压缩感知重构算法之OMP算法python实现 压缩感知重构算法之CoSaMP算法python实现 压缩感知重构算法之SP算法python实现 压缩感知重构算法之IHT算法python实现 压缩感知重构 ...
压缩感知重构算法之OLS算法python实现
压缩感知重构算法之OMP算法python实现 压缩感知重构算法之CoSaMP算法python实现 压缩感知重构算法之SP算法python实现 压缩感知重构算法之IHT算法python实现 压缩感知重构 ...
压缩感知重构算法之CoSaMP算法python实现
压缩感知重构算法之OMP算法python实现 压缩感知重构算法之CoSaMP算法python实现 压缩感知重构算法之SP算法python实现 压缩感知重构算法之IHT算法python实现 压缩感知重构 ...
压缩感知重构算法之IHT算法python实现
压缩感知重构算法之OMP算法python实现 压缩感知重构算法之CoSaMP算法python实现 压缩感知重构算法之SP算法python实现 压缩感知重构算法之IHT算法python实现 压缩感知重构 ...
压缩感知重构算法之SP算法python实现
压缩感知重构算法之OMP算法python实现 压缩感知重构算法之CoSaMP算法python实现 压缩感知重构算法之SP算法python实现 压缩感知重构算法之IHT算法python实现 压缩感知重构 ...
随机推荐
tcp的简单介绍
为什么会有TCP/IP协议 在 世界上各地,各种各样的电脑运行着各自不同的操作系统为大家服务,这些电脑在表达同一种信息的时候所使用的方法是千差万别.就好像圣经中上帝打乱了各地人 的口音,让他们无法合作 ...
R12_专题知识总结提炼-AR模块
应收模块简介 应收模块是用来为企业提供应收款管理的模块. 当企业销售一笔商品或者发生其他影响收入和现金的业务的时候,需要在应收模块记账. 本文档以R12为例,11i可参考,只针对简单业务情况考虑,将应 ...
js禁止用户右键等操作
IE6-8支持css3属性
方法一.让IE6-8支持css3属性