import os
import shutil
#get names of files in the directory
def get_filename(filepath,filetype):
import os
filename = []
for root,dirs,files in os.walk(filepath):
for i in files:
if filetype in i:
filename.append(i)
return filename
def main():
srcfilepath1 = r'/home/jkx/Anaconda_workspace/task_2017_6_6/BLAST_experiment/bacteria_5000bp_subsequence/'
filetype = '.txt'
filename1 = get_filename(srcfilepath1,filetype)
filename1.sort(key = lambda x:int(x.split('_')[-1].split('.')[0]))
outfilename = 'BacteriaVirus_5000bp_subsequence_mark_' + str(i + 1) + '.txt'
outfile = open(outfilename,'a')
for i in range(len(filename1)):
infilename1 = srcfilepath1 + filename1[i]
infile1 = open(infilename1,'r')
shutil.copyfileobj(infile1,outfile)
infile1.close()
outfile.close()
main()
合并时主要用到python的shutil模块的copyfileobj方法,关于该方法的介绍详见官方文档:
https://docs.python.org/2/library/shutil.html