安装pyG

windows安装pyG

前情提要

anaconda安装包遇到“无法定位程序输入点于……动态链接库”问题解决方案
首次安装的pyG出现问题，因此选择下面的重新安装流程，安装成功，没有再次报错。

安装anaconda

记得勾选添加环境变量

创建环境

首先判断一下所要安装的pytorch需要什么版本的python

conda create -n pyGtorch19 python=3.9

安装pytorch

进入主页后，

https://pytorch.org/get-started/locally/

点击previous pytorch versions,然后找v2.0.0的pip安装

pip install torch==2.0.0+cpu torchvision==0.15.1+cpu torchaudio==2.0.1 --index-url https://download.pytorch.org/whl/cpu

测试版本

import pytorch
print(torch.__version__)

安装对应版本的pyG

https://pytorch-geometric.readthedocs.io/en/stable/install/installation.html

先安装下方的依赖，然后安装pyg

pip install torch_scatter torch_sparse torch_cluster torch_spline_conv -f https://data.pyg.org/whl/torch-2.0.0+cpu.html

pip install torch_geometric

代码测试

安装jupyter kernel

pip install ipykernel
python -m ipykernel install --user --name pygtorch22

from torch_geometric.datasets import Planetoid

dataset = Planetoid(root='/tmp/Cora', name='Cora')
print('len(dataset):{}'.format(len(dataset)))
print('dataset.num_classes:{}'.format(dataset.num_classes))
print('dataset.num_node_features:{}'.format(dataset.num_classes))

len(dataset):1
dataset.num_classes:7
dataset.num_node_features:7

注意，如果数据下载不下来，“科学开全局模式”可以解决。

linux服务器安装pyg

conda拷贝contextaqaGPU环境
参考https://pytorch-geometric.readthedocs.io/en/stable/install/installation.html
先安装依赖，再安装pyg

运行training.py报错

没有Glibc-2.29
所以参考下述连接进行安装：
https://stackoverflow.com/questions/74740941/how-can-i-resolve-this-issue-libm-so-6-version-glibc-2-29-not-found-c-c

安装过程中报错：
*** These critical programs are missing or too old: gawk bison *** Check the INSTALL file for required versions.

参考下述连接解决
https://www.cnblogs.com/rohens-hbg/p/14741823.html#:~:text=%E8%A7%A3%E5%86%B3%E5%8A%9E%E6%B3%95%EF%BC%9A%20%E6%9B%B4%E6%96%B0%E6%96%87%E4%BB%B6%E3%80%80gawk%20%E5%92%8C%E3%80%80bison%20%E5%91%BD%E4%BB%A4%E4%B8%BA%EF%BC%9A%20sudo%20apt-%20get,install%20gawk%20sudo%20apt-%20get%20install%20bison

解决失败，随记录，后期换集群设备的ubuntu 20.04系统解决。

ubuntu 20.04安装pyg

conda create -n pyg python==3.9

https://pytorch.org/get-started/previous-versions/
安装pytorch2.2.1

pip install torch==2.2.1 torchvision==0.17.1 torchaudio==2.2.1 --index-url https://download.pytorch.org/whl/cu121

安装pyg

pip install pyg_lib torch_scatter torch_sparse torch_cluster torch_spline_conv -f https://data.pyg.org/whl/torch-2.2.0+cu121.html

pip install torch_geometric