生物信息软件
java31
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bioconda安装记录
1、添加用户adduser sanpasswd sanchmod 644 /etc/sudoersvi /etc/sudoerssan ALL=(ALL) ALL2、获取miniconda3,安装到/home/san/miniconda3su sancd /home/sanmkdir softwarecd softwarewget https://mirrors.tuna.tsinghua.edu.cn/anaconda/miniconda/Minicond...原创 2021-12-11 01:21:28 · 1587 阅读 · 0 评论 -
conda更换源,forge、bioconda相关
conda更换源,添加cloud目录下的相关源,bioconda中科大源conda config --add channels https://mirrors.ustc.edu.cn/anaconda/pkgs/main/conda config --add channels https://mirrors.ustc.edu.cn/anaconda/pkgs/free/conda c...原创 2020-04-09 21:43:35 · 2941 阅读 · 0 评论 -
安装circos,安装依赖的perl模块
1、下载,解压wget http://circos.ca/distribution/circos-0.69-6.tgztar xzf circos-0.69-6.tgz2、执行./circos -moduleok 1.50 Carpok 0.39 Clonemissing Config::Generalok 3....原创 2020-04-01 23:25:15 · 724 阅读 · 0 评论 -
安装pasa
#1.安装依赖软件# installing GMAP#wget http://research-pub.gene.com/gmap/src/gmap-gsnap-2017-11-15.tar.gz -P ~/software/tar zxf /opt/software/gmap-gsnap-2017-11-15.tar.gz cd gmap-2017-11-15./configure...原创 2020-03-21 07:39:29 · 804 阅读 · 0 评论 -
blastn执行错误_version `GOMP_4.0' not found
blastn: /public/software/compiler/gnu/4.8.5/lib64/libgomp.so.1: version `GOMP_4.0' not found (required by blastn)strings /public/software/compiler/gnu/5.5.0/lib64/libgomp.so.1.0.0 | grep GOMPsudo...原创 2020-03-19 11:01:46 · 611 阅读 · 0 评论 -
安装Orthomcl
1、 Install vmwareworkstationrj12.0.0.64202.1442972430 Sn:ZU5NU-2XWD2-0806Z-WMP5G-NUHV62、 Use ubuntu-16.04.5-desktop-amd64.iso3、 change apt-get source by aliyunsudo mv /etc/apt/s...原创 2020-03-19 09:17:16 · 380 阅读 · 0 评论