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目录
一、规范写作标准格式
Abstract 摘要：文章的简介和概述目的、方法、结果、结论。
Keyword 关键词：3 ~ 5 个本文最相关的词语，可以从标题和摘要中提取。
Main text 正文：包括 introduction 、method（方法学）、results（结果）、discussion 。
Reference 参考文献：文章的参考文献，需要按照杂志社要求更改参考文献的格式。
注意，文章的图表需要按照期刊的要求制作，放在文章参考文献后。Figure legend 图注和 Table legend 表注，需要你对图表中的关键内容和标识的介绍描述。
二、明确论文投稿流程
筛选期刊需要考虑以下 4 个维度：影响因子、期刊领域、审稿或见刊时间是否在你的预期以及版面费。
全部权衡后可以放心选刊。在投递后，期刊编辑先进行初审，初审通过后派发给审稿人，2～4 日内审稿人给予修稿意见。
三、了解论文修改意见
责任编辑会根据审稿人的意见给出一些修改建议，包括：拒稿（Rejected）；大修（Major Revision）；小修（Minor Revision）；录用（Accepted）。
投稿系统中通常会显示以下 3 类状态：
（1）Required review completed：已收集到足够数量的审稿人意见
（2）Decision in Process：责任编辑正在酝酿意见
（3）Rejected/Major Revision/Minor Revision/Accepted：最终意见
四、论文投稿相关建议
（一）正视投稿
对于第一次投稿的同学们来说，投稿、改稿也是一个提高自身学术表达水平的过程。因此，不要把投稿视为研究的剩余物，而要把投稿视为学术生活的一个重要组成部分，认真研究如何投稿。
（二）固定阅读
每一类刊物、每一本刊物，都有自己的历史、风格，通过固定阅读，你可以知晓这些刊物的学术取向和选稿要求，做到知彼知己、心中有数。有了必要的阅读积累，再与期刊编辑沟通，便有了更多的共享知识，也会更加顺畅。
（三）不要海投
很多期刊都严禁一稿多投，而且无的放矢的海投也绝非良策。最好平时就有意识地阅读一些学术刊物，从研究阶段就熟悉、了解这些刊物，最后成文、投稿就会更加自然、顺畅。对于有些综合刊物，建议投递打印稿。
（四）经常开会
很多时候，学术期刊约稿不是“看人”，而是“看文”，学刊编辑经常旁听会议，如果你的文章很棒，又恰好符合在场学刊的选题需求的话，他们会主动来找你约稿的。
（五）多方核实
现在很多刊物都有经费支持，甚至还有国家社科基金资助，一般来说，多数刊物不收版面费。网络上的投稿一定要辨明真假。一般来说，那些带有不规律的数字的邮箱、域名多半是假的。一定要多方核实，不要轻易上当。
# -------------------------------------------------------------------------
# Swin Transfromer
# https://arxiv.org/abs/2103.14030
import torch
import torch.nn as nn
import torch.nn.functional as F
from timm.models.layers import DropPath, to_2tuple, trunc_normal_
class WindowAttention(nn.Module):
r""" Window based multi-head self attention (W-MSA) module with relative position bias.
It supports both of shifted and non-shifted window.
Args:
dim (int): Number of input channels.
window_size (tuple[int]): The height and width of the window.
num_heads (int): Number of attention heads.
qkv_bias (bool, optional): If True, add a learnable bias to query, key, value. Default: True
qk_scale (float | None, optional): Override default qk scale of head_dim ** -0.5 if set
attn_drop (float, optional): Dropout ratio of attention weight. Default: 0.0
proj_drop (float, optional): Dropout ratio of output. Default: 0.0
"""
def __init__(self, dim, window_size, num_heads, qkv_bias=True, qk_scale=None, attn_drop=0., proj_drop=0.):
super().__init__()
self.dim = dim
self.window_size = window_size # Wh, Ww
self.num_heads = num_heads
head_dim = dim // num_heads
self.scale = qk_scale or head_dim ** -0.5
# define a parameter table of relative position bias
self.relative_position_bias_table = nn.Parameter(
torch.zeros((2 * window_size[0] - 1) * (2 * window_size[1] - 1), num_heads)) # 2*Wh-1 * 2*Ww-1, nH
# get pair-wise relative position index for each token inside the window
coords_h = torch.arange(self.window_size[0])
coords_w = torch.arange(self.window_size[1])
coords = torch.stack(torch.meshgrid([coords_h, coords_w])) # 2, Wh, Ww
coords_flatten = torch.flatten(coords, 1) # 2, Wh*Ww
relative_coords = coords_flatten[:, :, None] - coords_flatten[:, None, :] # 2, Wh*Ww, Wh*Ww
relative_coords = relative_coords.permute(1, 2, 0).contiguous() # Wh*Ww, Wh*Ww, 2
relative_coords[:, :, 0] += self.window_size[0] - 1 # shift to start from 0
relative_coords[:, :, 1] += self.window_size[1] - 1
relative_coords[:, :, 0] *= 2 * self.window_size[1] - 1
relative_position_index = relative_coords.sum(-1) # Wh*Ww, Wh*Ww
self.register_buffer("relative_position_index", relative_position_index)
self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias)
self.attn_drop = nn.Dropout(attn_drop)
self.proj = nn.Linear(dim, dim)
self.proj_drop = nn.Dropout(proj_drop)
trunc_normal_(self.relative_position_bias_table, std=.02)
self.softmax = nn.Softmax(dim=-1)
def forward(self, x, mask=None):
"""
Args:
x: input features with shape of (num_windows*B, N, C)
mask: (0/-inf) mask with shape of (num_windows, Wh*Ww, Wh*Ww) or None
"""
B_, N, C = x.shape
qkv = self.qkv(x).reshape(B_, N, 3, self.num_heads, C // self.num_heads).permute(2, 0, 3, 1, 4)
q, k, v = qkv[0], qkv[1], qkv[2] # make torchscript happy (cannot use tensor as tuple)
q = q * self.scale
attn = (q @ k.transpose(-2, -1))
relative_position_bias = self.relative_position_bias_table[self.relative_position_index.view(-1)].view(
self.window_size[0] * self.window_size[1], self.window_size[0] * self.window_size[1], -1) # Wh*Ww,Wh*Ww,nH
relative_position_bias = relative_position_bias.permute(2, 0, 1).contiguous() # nH, Wh*Ww, Wh*Ww
attn = attn + relative_position_bias.unsqueeze(0)
if mask is not None:
nW = mask.shape[0]
attn = attn.view(B_ // nW, nW, self.num_heads, N, N) + mask.unsqueeze(1).unsqueeze(0)
attn = attn.view(-1, self.num_heads, N, N)
attn = self.softmax(attn)
else:
attn = self.softmax(attn)
attn = self.attn_drop(attn)
# print(attn.dtype, v.dtype)
x = (attn @ v).transpose(1, 2).reshape(B_, N, C)
x = self.proj(x)
x = self.proj_drop(x)
return x
def window_reverse(windows, window_size, H, W):
"""
Args:
windows: (num_windows*B, window_size, window_size, C)
window_size (int): Window size
H (int): Height of image
W (int): Width of image
Returns:
x: (B, H, W, C)
"""
B = int(windows.shape[0] / (H * W / window_size / window_size))
x = windows.view(B, H // window_size, W // window_size, window_size, window_size, -1)
x = x.permute(0, 1, 3, 2, 4, 5).contiguous().view(B, H, W, -1)
return x
class SwinTransformerLayer(nn.Module):
r""" Swin Transformer Layer.
Args:
dim (int): Number of input channels.
input_resolution (tuple[int]): Input resulotion.
num_heads (int): Number of attention heads.
window_size (int): Window size.
shift_size (int): Shift size for SW-MSA.
mlp_ratio (float): Ratio of mlp hidden dim to embedding dim.
qkv_bias (bool, optional): If True, add a learnable bias to query, key, value. Default: True
qk_scale (float | None, optional): Override default qk scale of head_dim ** -0.5 if set.
drop (float, optional): Dropout rate. Default: 0.0
attn_drop (float, optional): Attention dropout rate. Default: 0.0
drop_path (float, optional): Stochastic depth rate. Default: 0.0
act_layer (nn.Module, optional): Activation layer. Default: nn.GELU
norm_layer (nn.Module, optional): Normalization layer. Default: nn.LayerNorm
"""
def __init__(self, dim, num_heads, window_size=7, shift_size=0,
mlp_ratio=4., qkv_bias=True, qk_scale=None, drop=0., attn_drop=0., drop_path=0.,
act_layer=nn.GELU, norm_layer=nn.LayerNorm):
super().__init__()
self.dim = dim
self.num_heads = num_heads
self.window_size = window_size
self.shift_size = shift_size
self.mlp_ratio = mlp_ratio
# if min(self.input_resolution) <= self.window_size:
# # if window size is larger than input resolution, we don't partition windows
# self.shift_size = 0
# self.window_size = min(self.input_resolution)
assert 0 <= self.shift_size < self.window_size, "shift_size must in 0-window_size"
self.norm1 = norm_layer(dim)
self.attn = WindowAttention(
dim, window_size=to_2tuple(self.window_size), num_heads=num_heads,
qkv_bias=qkv_bias, qk_scale=qk_scale, attn_drop=attn_drop, proj_drop=drop)
self.drop_path = DropPath(drop_path) if drop_path > 0. else nn.Identity()
self.norm2 = norm_layer(dim)
mlp_hidden_dim = int(dim * mlp_ratio)
self.mlp = Mlp(in_features=dim, hidden_features=mlp_hidden_dim, act_layer=act_layer, drop=drop)
def create_mask(self, H, W):
# calculate attention mask for SW-MSA
img_mask = torch.zeros((1, H, W, 1)) # 1 H W 1
h_slices = (slice(0, -self.window_size),
slice(-self.window_size, -self.shift_size),
slice(-self.shift_size, None))
w_slices = (slice(0, -self.window_size),
slice(-self.window_size, -self.shift_size),
slice(-self.shift_size, None))
cnt = 0
for h in h_slices:
for w in w_slices:
img_mask[:, h, w, :] = cnt
cnt += 1
mask_windows = window_partition(img_mask, self.window_size) # nW, window_size, window_size, 1
mask_windows = mask_windows.view(-1, self.window_size * self.window_size)
attn_mask = mask_windows.unsqueeze(1) - mask_windows.unsqueeze(2)
attn_mask = attn_mask.masked_fill(attn_mask != 0, float(-100.0)).masked_fill(attn_mask == 0, float(0.0))
return attn_mask
def forward(self, x):
# reshape x[b c h w] to x[b l c]
_, _, H_, W_ = x.shape
Padding = False
if min(H_, W_) < self.window_size or H_ % self.window_size!=0:
Padding = True
# print(f'img_size {min(H_, W_)} is less than (or not divided by) window_size {self.window_size}, Padding.')
pad_r = (self.window_size - W_ % self.window_size) % self.window_size
pad_b = (self.window_size - H_ % self.window_size) % self.window_size
x = F.pad(x, (0, pad_r, 0, pad_b))
# print('2', x.shape)
B, C, H, W = x.shape
L = H * W
x = x.permute(0, 2, 3, 1).contiguous().view(B, L, C) # b, L, c
# create mask from init to forward
if self.shift_size > 0:
attn_mask = self.create_mask(H, W).to(x.device)
else:
attn_mask = None
shortcut = x
x = self.norm1(x)
x = x.view(B, H, W, C)
# cyclic shift
if self.shift_size > 0:
shifted_x = torch.roll(x, shifts=(-self.shift_size, -self.shift_size), dims=(1, 2))
else:
shifted_x = x
# partition windows
x_windows = window_partition(shifted_x, self.window_size) # nW*B, window_size, window_size, C
x_windows = x_windows.view(-1, self.window_size * self.window_size, C) # nW*B, window_size*window_size, C
# W-MSA/SW-MSA
attn_windows = self.attn(x_windows, mask=attn_mask) # nW*B, window_size*window_size, C
# merge windows
attn_windows = attn_windows.view(-1, self.window_size, self.window_size, C)
shifted_x = window_reverse(attn_windows, self.window_size, H, W) # B H' W' C
# reverse cyclic shift
if self.shift_size > 0:
x = torch.roll(shifted_x, shifts=(self.shift_size, self.shift_size), dims=(1, 2))
else:
x = shifted_x
x = x.view(B, H * W, C)
# FFN
x = shortcut + self.drop_path(x)
x = x + self.drop_path(self.mlp(self.norm2(x)))
x = x.permute(0, 2, 1).contiguous().view(-1, C, H, W) # b c h w
if Padding:
x = x[:, :, :H_, :W_] # reverse padding
return x
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