先自我介绍一下,小编浙江大学毕业,去过华为、字节跳动等大厂,目前在阿里
深知大多数程序员,想要提升技能,往往是自己摸索成长,但自己不成体系的自学效果低效又漫长,而且极易碰到天花板技术停滞不前!
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Versions listed are the versions PhaVa has been tested on.
PhaVa is developed and tested on Linux operating systems (CentOS Linux 7), however it should compatible with Mac OSX and Windows
Usage
The PhaVa workflow is divided into three steps: locate, create, and ratio.
phava locate -i genome.fasta -d out_dir
phava create -d out_dir
phava ratio -r long_reads.fastq -d out_dir
Alternatively, all three steps can be run in a single command via variation_wf
phava variation_wf -i genome.fasta -r long_reads.fastq -d out_dir
Output from each step is centered around a output directory (-d) and should be the same directory for the entire workflow The locate and create steps only need to be performed once for a given genome or metagenome, and ratio can then be run on long-read samples using the same output directory (-d)
Any invertons with at least 1 read aligning in the reverse orientation will be found in the output. However, it is strongly recommended to fruther filter based on a minimum reverse read count and minimum % reverse of all reads cutoff (3 and 3% are recommended, respectively)
Expected output:
Installation
Beyond installing dependencies, PhaVa install is:
先自我介绍一下,小编浙江大学毕业,去过华为、字节跳动等大厂,目前在阿里
深知大多数程序员,想要提升技能,往往是自己摸索成长,但自己不成体系的自学效果低效又漫长,而且极易碰到天花板技术停滞不前!
因此收集整理了一份《2024年最新Linux运维全套学习资料》,初衷也很简单,就是希望能够帮助到想自学提升又不知道该从何学起的朋友。
既有适合小白学习的零基础资料,也有适合3年以上经验的小伙伴深入学习提升的进阶课程,涵盖了95%以上运维知识点,真正体系化!
由于文件比较多,这里只是将部分目录截图出来,全套包含大厂面经、学习笔记、源码讲义、实战项目、大纲路线、讲解视频,并且后续会持续更新
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