Data handling tools（生成tsv）

链接：IO - Clinica Documentation (inria.fr)

1. create-subjects-visits 创建tsv

clinica iotools create-subjects-visits BIDS_DIRECTORY OUTPUT_TSV

2.check-missing-modalities 缺失的M00文件

clinica iotools check-missing-modalities [OPTIONS] BIDS_DIRECTORY OUTPUT_DIRECTORY

3.check-missing-processing

clinica iotools check-missing-processing BIDS_DIRECTORY CAPS_DIRECTORY OUTPUT_FILE

getlabels - Extract labels specific to Alzheimer's disease Description （划分标签

clinicadl tsvtool getlabels <merged_tsv> <missing_mods> <results_path>

clinicadl tsvtool getlabels ./baseline_new/baseline_participants.tsv baseline_miss baseline_labels --diagnoses AD CN MCI

kfold - K-fold split

clinicadl tsvtool kfold <formatted_data_path>

 训练

clinicadl train image cnn baseline_new t1-linear baseline_labels baseline_results Conv5_FC3 --n_splits 5

clinicadl train from_json <json_path> <output_dir>