Linux of bioinformatics

For some softwares by to ues

1. ascp

It is not suitable for the latest version because it is not convenient to use.

wget https://ak-delivery04-mul.dhe.ibm.com/sar/CMA/OSA/092u0/0/ibm-aspera-connect-3.10.0.180973-linux-g2.12-64.tar.gz
tar xvf ibm-aspera-connect-3.10.0.180973-linux-g2.12-64.tar.gz
./ibm-aspera-connect-3.10.0.180973-linux-g2.12-64.sh

For more environment variable：

echo "PATH=$PATH:/yourpath/.aspera/connect/bin/" >> ~/.bashrc
yourpath= 1. cd ~;2. pwd;
source ~/.bashrc

Check it;

ascp

That’s good!

Here are some problems encountered during usages and their respective solutions.
a)

ascp: Private key file not found at path.aspera/connect/etc/asperaweb_id_dsa.openssh, exiting.

Session Stop  (Error: Private key file not found at path i/.aspera/connect/etc/asperaweb_id_dsa.openssh)

this is your path is not right and you coulud ues：

~/.aspera/connect/etc/asperaweb_id_dsa.openssh

For setting

mkdir /xxx/user/yourename
sudo useradd -d /xxx/user/yourename -m yourname -s /bin/bash
sudo passwd yourname

2. NVIDIA-SMI has failed because it couldn‘t communicate with the NVIDIA driver.

2.1 use cammand to remove before installed

sudo apt-get remove --purge nvidia*

2.2 use cammand to device what version to use(slect recommand)

ubuntu-drivers devices

2.3 installed and reboot

sudo apt install nvidia-driver-XXX
or use this
sudo ubuntu-drivers autoinstall
sudo reboot