R studio安装R包时编译失败的解决方法

最新推荐文章于 2025-03-11 08:53:05 发布

Akl_kuro

最新推荐文章于 2025-03-11 08:53:05 发布

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文章标签： r语言

本文链接：https://blog.csdn.net/qq_39328617/article/details/122982257

版权

在尝试安装R包如cli时，遇到编译错误'c:/rtools40/mingw32/bin/gcc: No such file or directory'。原因是RTools的路径不正确。通过修改(R_HOME)/etc/i386和(R_HOME)/etc/x64下的makeconf文件，设置正确的RTOOLS40_HOME和BINPREF路径，解决了这个问题。在修改后重启R Studio，R包安装成功。

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bug示例

例如我想安装cli这个R包，需要对binary source code进行编译，运行install.packages之后显示如下报错

>install.packages("cli")

  有二进制版本的，但源代码版本是后来的:
    binary source needs_compilation
cli  3.1.1  3.2.0              TRUE

安装源码包‘cli’

trying URL 'https://cran.rstudio.com/src/contrib/cli_3.2.0.tar.gz'
Content type 'application/x-gzip' length 493192 bytes (481 KB)
downloaded 481 KB

* installing *source* package 'cli' ...
** package 'cli' successfully unpacked and MD5 sums checked
** using staged installation
Warning in parse(con, encoding = "UTF-8") :
  argument encoding="UTF-8" is ignored in MBCS locales
** libs

*** arch - i386
"c:/rtools40/mingw32/bin/"gcc  -I"E:/R-4.1.2/include" -DNDEBUG          -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c ansi.c -o ansi.o
sh: c:/rtools40/mingw32/bin/gcc: No such file or directory
make: *** [E:/R-4.1.2/etc/i386/Makeconf:238: ansi.o] Error 127
ERROR: compilation failed for package 'cli'
* removing 'E:/R-4.1.2/library/cli'
Warning in install.packages :
  installation of package ‘cli’ had non-zero exit status

比较关键的一行报错是

sh: c:/rtools40/mingw32/bin/gcc: No such file or directory

似乎是R的默认编译器路径不存在，查看了一下C盘，也确实没有这个文件夹，然后我用sys.which(‘make’)查看了一下我的make.exe的路径，发现被安装到E盘去了，因为是很久之前装的R 3.6.3，后来我update到了R 4.1.2，并不清楚为啥Rtools会在E盘，在stack overflow上搜了一下，发现了这两篇帖子
Why can’t I install properly rtools40 x64 Widows?
Rtools not being detected by R
于是按照了里面的操作，修改了R 4.1.2安装路径里的makeconf文件，解决了这个bug。

解决方法

makeconf在(R_HOME)/etc/i386和(R_HOME)/etc/x64这两个文件夹下，（R_HOME）代指你的R安装路径，例如我的就是E:/R-4.1.2，用记事本打开i386文件夹下的makeconf文件，找到如下代码段（应该就在刚开头10几行的样子）

## The rtools40 installer sets RTOOLS40_HOME, default to standard install path
RTOOLS40_HOME ?= c:/rtools40
RTOOLS40_ROOT ?= $(subst \,/,$(RTOOLS40_HOME))

## Things which are substituted by fixed/Makefile (and also -O2 -> -O2)
WIN = 32
MINGW_PREFIX = /mingw$(WIN)
BINPREF ?= "$(RTOOLS40_ROOT)/mingw32/bin/"
COMPILED_BY = gcc-8.3.0

修改RTOOLS40_HOME的路径为Rtools的实际安装路径，并把BINPREF的路径也修改成对应的路径

## The rtools40 installer sets RTOOLS40_HOME, default to standard install path
RTOOLS40_HOME ?= E:/Rtools
RTOOLS40_ROOT ?= $(subst \,/,$(RTOOLS40_HOME))

## Things which are substituted by fixed/Makefile (and also -O2 -> -O2)
WIN = 32
MINGW_PREFIX = /mingw$(WIN)
BINPREF ?= "$(RTOOLS40_ROOT)/mingw_32/bin/"
COMPILED_BY = gcc-8.3.0

同样地，也需要修改x64文件夹下的makeconf文件，修改完后如下所示，区别在于一个是mingw_32，一个是mingw_64，分别对应32位和64位的，原帖中说如果安装的是32位就修改i386下的makeconf，如果是64位就修改x64，但实测需要两个都修改才能起效。

## The rtools40 installer sets RTOOLS40_HOME, default to standard install path
RTOOLS40_HOME ?= E:/Rtools
RTOOLS40_ROOT ?= $(subst \,/,$(RTOOLS40_HOME))

## Things which are substituted by fixed/Makefile (and also -O2 -> -O2)
WIN = 64
MINGW_PREFIX = /mingw$(WIN)
BINPREF ?= "$(RTOOLS40_ROOT)/mingw_64/bin/"
COMPILED_BY = gcc-8.3.0

修改完成后，重启一下R studio（或者restart r session），再次安装R包并编译

>install.packages("cli")

  有二进制版本的，但源代码版本是后来的:
    binary source needs_compilation
cli  3.1.1  3.2.0              TRUE

安装源码包‘cli’

trying URL 'https://cran.rstudio.com/src/contrib/cli_3.2.0.tar.gz'
Content type 'application/x-gzip' length 493192 bytes (481 KB)
downloaded 481 KB

* installing *source* package 'cli' ...
** package 'cli' successfully unpacked and MD5 sums checked
** using staged installation
Warning in parse(con, encoding = "UTF-8")