DNA Sorting
Time Limit: 1000MS | Memory Limit: 10000K | |
Total Submissions: 80676 | Accepted: 32471 |
Description
One measure of ``unsortedness'' in a sequence is the number of pairs of entries that are out of order with respect to each other. For instance, in the letter sequence ``DAABEC'', this measure is 5, since D is greater than four letters to its right and E is greater than one letter to its right. This measure is called the number of inversions in the sequence. The sequence ``AACEDGG'' has only one inversion (E and D)---it is nearly sorted---while the sequence ``ZWQM'' has 6 inversions (it is as unsorted as can be---exactly the reverse of sorted).
You are responsible for cataloguing a sequence of DNA strings (sequences containing only the four letters A, C, G, and T). However, you want to catalog them, not in alphabetical order, but rather in order of ``sortedness'', from ``most sorted'' to ``least sorted''. All the strings are of the same length.
You are responsible for cataloguing a sequence of DNA strings (sequences containing only the four letters A, C, G, and T). However, you want to catalog them, not in alphabetical order, but rather in order of ``sortedness'', from ``most sorted'' to ``least sorted''. All the strings are of the same length.
Input
The first line contains two integers: a positive integer n (0 < n <= 50) giving the length of the strings; and a positive integer m (0 < m <= 100) giving the number of strings. These are followed by m lines, each containing a string of length n.
Output
Output the list of input strings, arranged from ``most sorted'' to ``least sorted''. Since two strings can be equally sorted, then output them according to the orginal order.
Sample Input
10 6 AACATGAAGG TTTTGGCCAA TTTGGCCAAA GATCAGATTT CCCGGGGGGA ATCGATGCAT
Sample Output
CCCGGGGGGA AACATGAAGG GATCAGATTT ATCGATGCAT TTTTGGCCAA TTTGGCCAAA代码:
<span style="font-size:14px;">import java.util.Arrays;
import java.util.Scanner;
public class P1007_DNASorting {
private static class DNA implements Comparable{
private int inversionnum;
private String dnasq;
@Override
public int compareTo(Object o) {
DNA dna=(DNA)o;
if(this.inversionnum>dna.inversionnum)
return 1;
else if(this.inversionnum<dna.inversionnum)
return -1;
else return 0;
}
}
public static void main(String[] args) {
Scanner in = new Scanner(System.in);
int len=in.nextInt();
int T=in.nextInt();
DNA[] dna=new DNA[T];
int[] n= new int[4];
for(int i=0;i<T;i++){
dna[i]=new DNA();
dna[i].dnasq=in.next();
dna[i].inversionnum=inversionNumber(dna[i].dnasq,len);
}
Arrays.sort(dna);
for(int i=0;i<T;i++){
System.out.println(dna[i].dnasq);
}
}
public static int inversionNumber(String s,int len){
int ans=0;
int A,C,G;
A=C=G=0;
for(int i=len-1;i>=0;i--){
switch(s.charAt(i)){
case 'A':{
A++;
break;
}
case 'C':{
C++;
ans+=A;
break;
}
case 'G':{
G++;
ans+=A+C;
break;
}
case 'T':{
ans+=A+C+G;
break;
}
}
}
return ans;
}
}</span>