matlab squareform,Matlab聚簇工具箱

Quantum clustering of microarray expression data in a truncated SVD spaceDavid Horn and Inon Axel

Bioinformatics 19, 1110-1115 (2003)

http://neuron.tau.ac.il/%7Ehorn/publications/bioinfo.ps.gz

code: http://neuron.tau.ac.il/%7Ehorn/QC.htm

Fuzzy C-Meanshttp://www-igbmc.u-strasbg.fr/projets/fcm/

Fuzzy C-means method for clustering microarray data.Dembele D, Kastner P., Bioinformatics. 2003 May 22;19(8):973-80

http://bioinformatics.oxfordjournals.org/cgi/reprint/19/8/973.pdf

Miscellaneous MATLAB Software, Tricks and DemonstrationsGavin Cawley (School of Computing Sciences, University of East Anglia)

http://theoval.cmp.uea.ac.uk/~gcc/matlab/

Cluster Matlab Cluster Analysis includes cophenet - Cophenetic coefficient, cluster - Construct clusters from LINKAGE output, clusterdata - Construct clusters from data, dendrogram - Generate dendrogram plot, inconsistent - Inconsistent values of a cluster tree, kmeans - k-means clustering, linkage - Hierarchical cluster information, pdist - Pairwise distance between observations, silhouette - Silhouette plot of clustered data, squareform - Square matrix formatted distance.

Fuzzy Modeling and Identification Toolbox

Robert Babuska

http://fuzzy.iau.dtu.dk/download/nf/

Hierarchical Clustering Explorer for Multidimensional Clustering and Outlier Detection

http://www.cs.umd.edu/hcil/multi-cluster/

Model-Based Clustering Toolbox for MatLab (includes advanced visualization tools for hierarchical clustering)

Angel Martinez and Wendy Martinez (Naval Surface Warfare Center, Dahlgren Division)

http://www.stat.washington.edu/fraley/mclust/soft.shtmlToolbox: ftp://ftp.u.washington.edu/public/mclust/MBCToolbox.zip