Clustering MATLAB
Toolbox
Routines
Quantum clustering of microarray expression data in a truncated SVD space David Horn and Inon Axel Bioinformatics 19, 1110-1115 (2003) http://neuron.tau.ac.il/%7Ehorn/publications/bioinfo.ps.gz code: http://neuron.tau.ac.il/%7Ehorn/QC.htm Fuzzy C-Means http://www-igbmc.u-strasbg.fr/projets/fcm/ Fuzzy C-means method for clustering microarray data. Dembele D, Kastner P., Bioinformatics. 2003 May 22;19(8):973-80 http://bioinformatics.oxfordjournals.org/cgi/reprint/19/8/973.pdf Classification Demo for MATLAB http://www.mathworks.com/products/demos/statistics/classdemo.html Miscellaneous MATLAB Software, Tricks and Demonstrations Gavin Cawley (School of Computing Sciences, University of East Anglia) http://theoval.cmp.uea.ac.uk/~gcc/matlab/ ClusterPack Matlab Toolbox Alexander Strehl http://www.lans.ece.utexas.edu/~strehl/soft.html
Cluster Routines Frank Dellaert http://www.cc.gatech.edu/~dellaert/html/software.html
Cluster Matlab Cluster Analysis includes cophenet - Cophenetic coefficient, cluster - Construct clusters from LINKAGE output, clusterdata - Construct clusters from data, dendrogram - Generate dendrogram plot, inconsistent - Inconsistent values of a cluster tree, kmeans - k-means clustering, linkage - Hierarchical cluster information, pdist - Pairwise distance between observations, silhouette - Silhouette plot of clustered data, squareform - Square matrix formatted distance.
EM Algorithm for Clustering (EMfc.m) By Panagiotis Braimakis http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=3713&objectType=file
Clustergram - Comnined dendrogram and heat plot http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=2442&objectType=file
Clustering with Matlab http://www.cs.ucl.ac.uk/staff/D.Corney/ClusteringMatlab.html
Fuzzy Modeling and Identification Toolbox Robert Babuska http://fuzzy.iau.dtu.dk/download/nf/
Hierarchical Clustering Explorer for Multidimensional Clustering and Outlier Detection http://www.cs.umd.edu/hcil/multi-cluster/
Model-Based Clustering Toolbox for MatLab (includes advanced visualization tools for hierarchical clustering) Angel Martinez and Wendy Martinez (Naval Surface Warfare Center, Dahlgren Division) http://www.stat.washington.edu/fraley/mclust/soft.shtml Toolbox: ftp://ftp.u.washington.edu/public/mclust/MBCToolbox.zip
Interesting conferences on the topic
2006 - SPMC / SoCCE / UoP
来源:http://www.tech.plym.ac.uk/spmc/links/classification/classification_matlab.html