mhmm em matlab,第二章 HMM工具箱命令使用说明.docx

HOW TO USE THE HMM TOOLBOX (MATLAB)一、离散输出的隐马尔科夫模型(DHMM，HMM with discrete outputs)最大似然参数估计EM(Baum Welch算法)The script dhmm_em_demo.m gives an example of how to learn an HMM with discrete outputs. Let there be Q=2 states and O=3 output symbols. We create random stochastic matrices as follows.O = 3;Q = 2;prior0 = normalise(rand(Q,1));transmat0 = mk_stochastic(rand(Q,Q));obsmat0 = mk_stochastic(rand(Q,O));?Now we sample nex=20 sequences of length T=10 each from this model, to use as training data.T=10;?? %序列长度nex=20;? %样本序列数目data = dhmm_sample(prior0, transmat0, obsmat0, nex, T);??????Here data is?20x10. Now we make a random guess as to what the parameters are,prior1 = normalise(rand(Q,1)); %初始状态概率transmat1 = mk_stochastic(rand(Q,Q)); %初始状态转移矩阵obsmat1 = mk_stochastic(rand(Q,O)); %初始观测状态到隐藏状态间的概率转移矩阵and improve our guess using 5 iterations of EM...[LL, prior2, transmat2, obsmat2] = dhmm_em(data, prior1, transmat1, obsmat1, 'max_iter', 5);%prior2, transmat2, obsmat2 为训练好后的初始概率，状态转移矩阵及混合状态概率转移矩阵LL(t) is the log-likelihood after iteration t, so we can plot the learning curve.序列分类To evaluate the log-likelihood of a trained model given test data, proceed as follows:loglik = dhmm_logprob(data, prior2, transmat2, obsmat2)? %HMM测试Note: the discrete alphabet is assumed to be {1, 2, ..., O}, where O = size(obsmat, 2). Hence data cannot contain any 0s.To classify a sequence into one of k classes, train up k HMMs, one per class, and then compute the log-likelihood that each model gives to the test sequence; if the i'th model is the most likely, then declare the class of the sequence to be class i.Computing the most probable sequence (Viterbi)First you need to evaluate B(i,t) = P(y_t | Q_t=i) for all t,i:B = multinomial_prob(data, obsmat);Then you can use[path] = viterbi_path(prior, transmat, B)??二、具有高斯混合输出的隐马尔科夫模型(GHMM，HMM with mixture of Gaussians outputs)Maximum likelihood parameter estimation using EM (Baum Welch)Let us generate nex=50 vector-valued sequences of length T=50; each