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RSS订阅原创 profile_mock_cluster2
==================================P.copri abundance per cluster==================================clusters=read.table("microbiome_clustering/plots/MockData_species_PAM.txt",sep = "\t",header = T,stringsAsFactors = F)clusters$sampleID=rownames(clusters)
2022-05-25 13:38:53
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原创 profile聚类
针对profile的处理#峰峦图绘制set.seed(10)#使生成的十个数据前后一致n <- 10palette <- distinctColorPalette(n)#生成差异明显的十个颜色g <- ggplot(dag3_species_plot, aes(x = Relative, y = Level,fill=Level,color=Level)) + theme_classic() + geom_density_ridges(alpha=0.8,scale = 2
2022-05-25 11:20:35
91
原创 cos_bray计算区别
import numpy as npfrom sklearn.metrics.pairwise import cosine_similarityA = np.array([10, 8, 4, 1, 1]).reshape(1,-1)B = np.array([7, 3, 8, 4, 0]).reshape(1,-1)A = np.array([10, 8, 4, 1, 1]).reshape(1,-1)B = np.array([10, 8, 4, 1, 1]).reshape(1,-1)pri
2022-04-21 12:36:12
1587
原创 更换清华源
vim etc/apt/sources.list清华源网址：https://mirrors.tuna.tsinghua.edu.cn/help/ubuntu/更改结束后：sudo apt-get update
2021-12-28 18:31:47
524
原创 Tensorflow和Keras安装
1.pip install tensorflow==2.0 -i https://pypi.doubanio.com/simple2.pip install keras -i https://pypi.doubanio.com/simple
2021-12-09 15:11:26
54
原创 ModuleNotFoundError: No module named ‘tensorflow‘
报错：ModuleNotFoundError: No module named ‘tensorflow’，查看anaconda文件夹下已经安装的包，存在tensorflow解决办法：import syssys.path.append(r’D:\python\anaconda\Lib\site-packages’)
2021-12-09 11:36:11
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