① conda 安装,error的话就根据报错的那个内容安装那个包
http://bioconda.github.io/index.html
如:message: post-link script failed for package http://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda::bioconductor-genomeinfodbdata-1.2.7-r41hdfd78af_2
就安装相应的genomeinfodbdata包即可:
conda install -c bioconda bioconductor-genomeinfodbdata
② 源码安装,Bioconductor中的source,Bioconductor - BSgenome.Hsapiens.UCSC.hg19
下载到任意一个目录中,但要激活当前的conda环境
tar -xzvf BSgenome.Hsapiens.UCSC.hg19_1.4.3.tar.gz
cd BSgenome.Hsapiens.UCSC.hg19
R CMD INSTALL .
③ BiocManager安装
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("motifbreakR")