FSL--＞JHU-WhiteMatter-labels-2mm

最新推荐文章于 2024-11-04 16:09:26 发布

Begapunk_5_atlas

最新推荐文章于 2024-11-04 16:09:26 发布

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分类专栏： Answer 文章标签：神经网络

本文链接：https://blog.csdn.net/weixin_61425048/article/details/136835199

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fslinfo /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm.nii.gz

#报错了，真奇怪，NIfTI文件中sform和qform中存储的左右顺序不一致，导致无法将sform复制到qform，这会导致图像在空间中的方向不正确
#ERROR: Inconsistent left-right order stored in sform and qform in file /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm
       Using sform instead of qform values

data_type      UINT8
dim1           91
dim2           109
dim3           91
dim4           1
datatype       2
pixdim1        2.000000
pixdim2        2.000000
pixdim3        2.000000
pixdim4        1.000000
cal_max        48.0000
cal_min        0.0000
file_type      NIFTI-1+

fslorient -getsform /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm.nii.gz
#让我看看sform是什么？
#ERROR: Inconsistent left-right order stored in sform and qform in file /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm
       Using sform instead of qform values

#ERROR: Inconsistent left-right order stored in sform and qform in file /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm
       Using sform instead of qform values

2 0 0 -90 0 2 0 -126 0 0 2 -72 0 0 0 1

fslorient -getqform /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm.nii.gz
#再让我看看qform是什么？
#ERROR: Inconsistent left-right order stored in sform and qform in file /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm
       Using sform instead of qform values

#ERROR: Inconsistent left-right order stored in sform and qform in file /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm
       Using sform instead of qform values

2 0 -0 -90 0 2 -0 -126 0 0 -2 -72 0 0 0 1 

fslorient -copysform2qform /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm.nii.gz
#把qform改成sform，那岂不就可以识别了
#ERROR: Inconsistent left-right order stored in sform and qform in file /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm
       Using sform instead of qform values

#ERROR: Inconsistent left-right order stored in sform and qform in file /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm
       Using sform instead of qform values

#ERROR: Inconsistent left-right order stored in sform and qform in file /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm
       Using sform instead of qform values

#ERROR: Inconsistent left-right order stored in sform and qform in file /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm
       Using sform instead of qform values

#查看是否修改成功
fslorient -getsform /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm.nii.gz
2 0 0 -90 0 2 0 -126 0 0 2 -72 0 0 0 1 
fslorient -getqform /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm.nii.gz
2 0 0 -90 0 2 0 -126 0 0 2 -72 0 0 0 1

#欸，不报错了，嗯，标准空间的的这个图谱应该是好了
fslinfo /media/sf_Sharing/Atlas/JHU-WhiteMatter-labels-2mm.nii.gz
data_type      UINT8
dim1           91
dim2           109
dim3           91
dim4           1
datatype       2
pixdim1        2.000000
pixdim2        2.000000
pixdim3        2.000000
pixdim4        1.000000
cal_max        48.0000
cal_min        0.0000
file_type      NIFTI-1+

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