Time
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Log Message
0.8s
0
Please wait a moment while I gather a list of all available modules...
1.1s
1
/opt/conda/lib/python3.6/site-packages/Bio/PopGen/Async/__init__.py:17: BiopythonDeprecationWarning: Bio.PopGen.Async has been deprecated, and we intend to remove it in a future release of Biopython. If you would like to continue using it, please contact the Biopython developers via the mailing list.
" via the mailing list.", BiopythonDeprecationWarning)
1.2s
2
/opt/conda/lib/python3.6/site-packages/Bio/PopGen/FDist/__init__.py:28: BiopythonDeprecationWarning: Bio.PopGen.FDist has been deprecated, and we intend to remove it in a future release of Biopython. If you would like to continue using it, please contact the Biopython developers via the mailing list.
" via the mailing list.", BiopythonDeprecationWarning)
/opt/conda/lib/python3.6/site-packages/Bio/PopGen/SimCoal/__init__.py:17: BiopythonDeprecationWarning: Bio.PopGen.SimCoal has been deprecated, and we intend to remove it in a future release of Biopython. If you would like to continue using it, please contact the Biopython developers via the mailing list.
" via the mailing list.", BiopythonDeprecationWarning)
1.3s
3
/opt/conda/lib/python3.6/site-packages/Bio/SearchIO/__init__.py:211: BiopythonExperimentalWarning: Bio.SearchIO is an experimental submodule which may undergo significant changes prior to its future official release.
BiopythonExperimentalWarning)
1.4s
4
/opt/conda/lib/python3.6/site-packages/Bio/codonalign/__init__.py:31: BiopythonExperimentalWarning: Bio.codonalign is an experimental module which may undergo significant changes prior to its future official release.
BiopythonExperimentalWarning)
1.4s
5
/opt/conda/lib/python3.6/site-packages/Bio/phenotype/__init__.py:102: BiopythonExperimentalWarning: Bio.phenotype is an experimental submodule which may undergo significant changes prior to its future official release.
BiopythonExperimentalWarning)
2.2s
6
/opt/conda/lib/python3.6/site-packages/IPython/kernel/__init__.py:13: ShimWarning: The `IPython.kernel` package has been deprecated. You should import from ipykernel or jupyter_client instead.
"You should import from ipykernel or jupyter_client instead.", ShimWarning)
2.6s
7
Fontconfig warning: ignoring C.UTF-8: not a valid language tag
4.7s
8
/opt/conda/lib/python3.6/site-packages/matplotlib/__init__.py:1401: UserWarning: This call to matplotlib.use() has no effect
because the backend has already been chosen;
matplotlib.use() must be called *before* pylab, matplotlib.pyplot,
or matplotlib.backends is imported for the first time.
warnings.warn(_use_error_msg)
56.4s
9
/opt/conda/lib/python3.6/site-packages/matplotlib/cbook.py:136: MatplotlibDeprecationWarning: The spectral and spectral_r colormap was deprecated in version 2.0. Use nipy_spectral and nipy_spectral_r instead.
warnings.warn(message, mplDeprecation, stacklevel=1)
63.5s
10
/opt/conda/lib/python3.6/site-packages/matplotlib/__init__.py:1401: UserWarning: This call to matplotlib.use() has no effect
because the backend has already been chosen;
matplotlib.use() must be called *before* pylab, matplotlib.pyplot,
or matplotlib.backends is imported f
Line #
Log Message
0.8s
0
Please wait a moment while I gather a list of all available modules...
1.1s
1
/opt/conda/lib/python3.6/site-packages/Bio/PopGen/Async/__init__.py:17: BiopythonDeprecationWarning: Bio.PopGen.Async has been deprecated, and we intend to remove it in a future release of Biopython. If you would like to continue using it, please contact the Biopython developers via the mailing list.
" via the mailing list.", BiopythonDeprecationWarning)
1.2s
2
/opt/conda/lib/python3.6/site-packages/Bio/PopGen/FDist/__init__.py:28: BiopythonDeprecationWarning: Bio.PopGen.FDist has been deprecated, and we intend to remove it in a future release of Biopython. If you would like to continue using it, please contact the Biopython developers via the mailing list.
" via the mailing list.", BiopythonDeprecationWarning)
/opt/conda/lib/python3.6/site-packages/Bio/PopGen/SimCoal/__init__.py:17: BiopythonDeprecationWarning: Bio.PopGen.SimCoal has been deprecated, and we intend to remove it in a future release of Biopython. If you would like to continue using it, please contact the Biopython developers via the mailing list.
" via the mailing list.", BiopythonDeprecationWarning)
1.3s
3
/opt/conda/lib/python3.6/site-packages/Bio/SearchIO/__init__.py:211: BiopythonExperimentalWarning: Bio.SearchIO is an experimental submodule which may undergo significant changes prior to its future official release.
BiopythonExperimentalWarning)
1.4s
4
/opt/conda/lib/python3.6/site-packages/Bio/codonalign/__init__.py:31: BiopythonExperimentalWarning: Bio.codonalign is an experimental module which may undergo significant changes prior to its future official release.
BiopythonExperimentalWarning)
1.4s
5
/opt/conda/lib/python3.6/site-packages/Bio/phenotype/__init__.py:102: BiopythonExperimentalWarning: Bio.phenotype is an experimental submodule which may undergo significant changes prior to its future official release.
BiopythonExperimentalWarning)
2.2s
6
/opt/conda/lib/python3.6/site-packages/IPython/kernel/__init__.py:13: ShimWarning: The `IPython.kernel` package has been deprecated. You should import from ipykernel or jupyter_client instead.
"You should import from ipykernel or jupyter_client instead.", ShimWarning)
2.6s
7
Fontconfig warning: ignoring C.UTF-8: not a valid language tag
4.7s
8
/opt/conda/lib/python3.6/site-packages/matplotlib/__init__.py:1401: UserWarning: This call to matplotlib.use() has no effect
because the backend has already been chosen;
matplotlib.use() must be called *before* pylab, matplotlib.pyplot,
or matplotlib.backends is imported for the first time.
warnings.warn(_use_error_msg)
56.4s
9
/opt/conda/lib/python3.6/site-packages/matplotlib/cbook.py:136: MatplotlibDeprecationWarning: The spectral and spectral_r colormap was deprecated in version 2.0. Use nipy_spectral and nipy_spectral_r instead.
warnings.warn(message, mplDeprecation, stacklevel=1)
63.5s
10
/opt/conda/lib/python3.6/site-packages/matplotlib/__init__.py:1401: UserWarning: This call to matplotlib.use() has no effect
because the backend has already been chosen;
matplotlib.use() must be called *before* pylab, matplotlib.pyplot,
or matplotlib.backends is imported f