Ab3P使用尝试

Ab3P

生物医药文本缩写识别工具。

原文：Abbreviation definition identification based on automatic precision estimates. Sohn S, Comeau DC, Kim W, Wilbur WJ. BMC Bioinformatics. 2008 Sep 25;9:402. PubMed ID: 18817555

代码地址：https://github.com/ncbi-nlp/Ab3P

安装步骤

1. Install the NCBITextLib library (https://github.com/ncbi-nlp/NCBITextLib)

2. Define the NCBITEXTLIB variable in the file Makefile, in the main
   directory and the Library directory, to point to where NCBITextLib is
   located.

3. The command make builds the library, builds the program, and creates
   the data files.

4. The command make test runs the abbreviation identification program on
   our gold standard and compares your results to our results. They
   should be identical.
   坑：

1. 需要clone并make library
2. 需要绝对路径

运行

identify_abbr.C中第43行:
ab3p.get_abbrs( line, abbrs );
识别并返回abbr|full name|precision
但是，使用测试数据发现返回结果为空。