Kaiju: Fast and sensitive taxonomic classification for metagenomics

Kaiju: Fast and sensitive taxonomic classification for  metagenomics

 

 

问题描述：However, nucleotide comparison using a fixed k-mer length often lacks the sensitivity to overcome the evolutionary distance between sampled species and genomes in the reference database.

然而，使用一个定长的k-mer核酸序列比对往往会缺少克服在样本物种和参考数据库中的基因之间的进化距离的敏感度。

 

 

解决方法：Here, we present the novel metagenome classifier Kaiju for fast assignment of reads to taxa.

这里，我们提出新的宏基因主分类器kaiju-将read快速分类到物种上。

Kaiju finds maximum exact