pybids 笔记

最新推荐文章于 2023-12-05 22:03:50 发布

danielzou1001

最新推荐文章于 2023-12-05 22:03:50 发布

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分类专栏：核磁数据分析文章标签： python 机器学习开发语言

本文链接：https://blog.csdn.net/danielzou1001/article/details/125472018

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pybids 笔记

from bids import BIDSLayout
from bids.tests import get_test_data_path
import os

初始化

data_path = os.path.join(get_test_data_path(), '7t_trt')
# Here we're using an example BIDS dataset that's bundled with the pybids tests
	
layout = BIDSLayout(data_path)
# Initialize the layout

BIDS Layout: …/pybids/bids/tests/data/7t_trt | Subjects: 10 | Sessions: 20 | Runs: 20

查找

all_files = layout.get() #查找所有满足BIDS格式的文件

layout.get(return_type='filename')#查找所有满足BIDS格式的文件并返回文件名

layout.get(subject='01', extension='nii.gz', suffix='bold', return_type='filename')
# 【通过entity查找】提取第一个被试、文件名拓展名为nii.gz的bold信号的文件名 Retrieve filenames of all BOLD runs for subject 01

layout.get(subject=['01', '02'], Sampling