POJ 1080 Human Gene Functions DP

题目就不解释了。

这里讲一下转移方程，dp[i][j](匹配到字符串1的i位，字符串2的j位)=MAX(dp[i-1][j-1]+score[a[i]][b[j]](i,j位匹配),dp[i-1][j]+score[a[i]][](i位和'-'匹配),dp[i][j-1]+score[b[j]][ ](j位和'-'匹配))；

#include <iostream>
#include <cstdio>
#include <algorithm>
#include <string>
#include <cmath>
#include <cstring>
#include <queue>
#include <set>
#include <vector>
#include <stack>
#include <map>
#include <iomanip>
#define PI acos(-1.0)
#define Max 105
#define inf 1<<28
#define LL(x) (x<<1)
#define RR(x)(x<<1|1)
using namespace std;

int score[5][5]=
{
    {5,-1,-2,-1,-3},
    {-1,5,-3,-2,-4},
    {-2,-3,5,-2,-2},
    {-1,-2,-2,5,-1},
    {-3,-4,-2,-1,0}
};

int dp[Max][Max];
char str1[Max],str2[Max];

int MAX(int a,int b,int c)
{
    return max(max(a,b),c);
}

int judge(char a)
{
    if(a=='A')
    return 0;
    if(a=='C')
    return 1;
    if(a=='G')
    return 2;
    if(a=='T')
    return 3;
    if(a=='-')
    return 4;
}

int match(int  la,int lb)
{
    int i,j;
    for(i=1;i<=la;++i)
    dp[i][0]=dp[i-1][0]+score[judge(str1[i])][4];
    for(i=1;i<=lb;++i)
    dp[0][i]=dp[0][i-1]+score[judge(str2[i])][4];
    for(i=1;i<=la;i++)
    for(j=1;j<=lb;j++)
    {
        //1.str1[i]与str2[j]匹配
        //2.str1[i]与"-"匹配
        //3.str2[j]与"-"匹配
        dp[i][j]=MAX(dp[i-1][j-1]+score[judge(str1[i])][judge(str2[j])],dp[i-1][j]+score[judge(str1[i])][4],dp[i][j-1]+score[judge(str2[j])][4]);
    }

}

int main()
{
    int i,j,k,l,n,m;
    int l1,l2;
    scanf("%d",&n);

    while(n--)
    {
        scanf("%d%s",&l1,&str1[1]);
        scanf("%d%s",&l2,&str2[1]);
        match(l1,l2);
        cout<<dp[l1][l2]<<endl;
    }

    return 0;
}