R错误信息处理
收集日常工作中遇到的R语言报错以及相关的解决问题
Noobfurid
生物信息学在读博士生
展开
-
Linux R包报错:version `GLIBCXX_3.4.29‘ not found
安装R包出现报错:unable to load shared object '/root/miniconda3/lib/R/library/Rcpp/libs/Rcpp.so': /lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.29' not found (required by /root/miniconda3/lib/R/library/Rcpp/libs/Rcpp.so)原创 2023-05-16 09:37:54 · 594 阅读 · 0 评论 -
Linux R shiny server 部署后报错:cannot open the connection
错误描述:在服务器上面部署了R的shiny app之后,部分页面显示“cannot open the connection”,根据这个错误提示搜索了一下,发现绝大部分问题是由于工作路径设置不正确导致的,但是这应当不是shiny app会出现的错误,于是查看了日志文件cd /var/log/shiny-server详细的错误信息是这样的:Warning in file(file, ifelse(append, "a", "w")) : cannot open file 'DBA_tam原创 2022-01-10 15:52:25 · 1321 阅读 · 0 评论 -
Linux R包报错:cram/cram_io.c:61:10: fatal error: lzma.h: No such file or directory
错误信息操作系统:ubuntu 20.04 64位安装Rhtslib包的时候出现错误,错误信息:> BiocManager::install("Rhtslib")cram/cram_io.c:61:10: fatal error: lzma.h: No such file or directory 61 | #include <lzma.h> | ^~~~~~~~compilation terminated.make[1]: ***原创 2021-12-11 14:31:32 · 1769 阅读 · 1 评论 -
Linux R包安装报错: rjcommon.h:11:10: fatal error: jpeglib.h: No such file or directory
Linux R包安装报错: In file included from read.c:1:rjcommon.h:11:10: fatal error: jpeglib.h: No such file or directory 11 | #include <jpeglib.h> | ^~~~~~~~~~~compilation terminated.make: *** [/usr/lib/R/etc/Makeconf:168: read.o] Error 1ERRO原创 2021-12-11 14:02:10 · 1325 阅读 · 0 评论