医学自然语言处理(NLP)相关论文汇总之 ACL 2022

医学自然语言处理(NLP)相关论文汇总之 ACL 2022

更多关于中文医疗自然语言处理的资源和论文汇总，请访问我的GitHub相关主页https://github.com/NiceSkyWang/Chinese_Medical_Natural_Language_Processing_Resources_and_Papers。最近重新整理一下仓库，把对应会议的论文的PDF汇总下载，有需要的可以直接从仓库下载。
文本分类baseline仓库链接：https://github.com/LovelyDayWang/Summary-of-Text-Classification-Models-PyTorch，欢迎star～

ACL 2022

本次整理共包含8篇主会长文，一篇主会短文，43篇bio workshop论文，5篇其他workshop论文，4篇finding论文。

评测比赛

CBLUE: A Chinese Biomedical Language Understanding Evaluation Benchmark

CBLUE：中国生物医学语言理解评估基准

论文链接：https://aclanthology.org/2022.acl-long.544/

文本生成

Discriminative Marginalized Probabilistic Neural Method for Multi-Document Summarization of Medical Literature

医学文献多文档摘要的判别边缘化概率神经方法

论文链接：https://aclanthology.org/2022.acl-long.15/

The patient is more dead than alive: exploring the current state of the multi-document summarisation of the biomedical literature

病人生不如死：探索生物医学文献多文献综述的现状

论文链接：https://aclanthology.org/2022.acl-long.350/

Position-based Prompting for Health Outcome Generation

基于位置的健康结果生成提示

论文地址：https://aclanthology.org/2022.bionlp-1.3/

Zero-Shot Aspect-Based Scientific Document Summarization using Self-Supervised Pre-training

使用自我监督预训练的基于零样本方面的科学文档摘要

论文链接：https://aclanthology.org/2022.bionlp-1.5/

Memory-aligned Knowledge Graph for Clinically Accurate Radiology Image Report Generation

用于生成临床准确放射影像报告的内存对齐知识图

论文链接：https://aclanthology.org/2022.bionlp-1.11/

文本分类

KenMeSH: Knowledge-enhanced End-to-end Biomedical Text Labelling

KenMeSH:知识增强的端到端生物医学文本标签

论文链接：https://aclanthology.org/2022.acl-long.210/

ICDBigBird: A Contextual Embedding Model for ICD Code Classification

ICDBigBird：用于 ICD 代码分类的上下文嵌入模型

论文链接：https://aclanthology.org/2022.bionlp-1.32/

Horses to Zebras: Ontology-Guided Data Augmentation and Synthesis for ICD-9 Coding

从马到斑马：用于 ICD-9 编码的本体引导数据增强和合成

论文链接：https://aclanthology.org/2022.bionlp-1.39/

Model Distillation for Faithful Explanations of Medical Code Predictions

医学代码预测忠实解释的模型蒸馏

论文链接：https://aclanthology.org/2022.bionlp-1.41/

A Novel Framework Based on Medical Concept Driven Attention for Explainable Medical Code Prediction via External Knowledge

一种基于医学概念驱动注意力的新框架，用于通过外部知识进行可解释的医学代码预测

论文链接：https://aclanthology.org/2022.findings-acl.110/

Incremental Intent Detection for Medical Domain with Contrast Replay Networks

具有对比重放网络的医学领域的增量意图检测

论文链接：https://aclanthology.org/2022.findings-acl.280/

Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding

代码同义词很重要：用于自动 ICD 编码的多个同义词匹配网络

论文链接：https://aclanthology.org/2022.acl-short.91/

Leveraging Task Transferability to Meta-learning for Clinical Section Classification with Limited Data

利用有限数据的临床部分分类的元学习任务可迁移性

论文链接：https://aclanthology.org/2022.acl-long.461/

预训练模型

Rewire-then-Probe: A Contrastive Recipe for Probing Biomedical Knowledge of Pre-trained Language Models

Rewire-then-Probe：探索预训练语言模型的生物医学知识的对比配方

论文链接：https://aclanthology.org/2022.acl-long.329/

BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model

BioBART：生物医学生成语言模型的预训练和评估

论文链接：https://aclanthology.org/2022.bionlp-1.9/

Pretrained Biomedical Language Models for Clinical NLP in Spanish

用于西班牙语临床 NLP 的预训练生物医学语言模型

论文链接：https://aclanthology.org/2022.bionlp-1.19/

Evaluating Biomedical Word Embeddings for Vocabulary Alignment at Scale in the UMLS Metathesaurus Using Siamese Networks

使用 Siamese 网络在 UMLS Metathesaurus 中大规模评估生物医学词嵌入以实现词汇对齐

论文链接：https://aclanthology.org/2022.insights-1.11/

多模态

ViLMedic: a framework for research at the intersection of vision and language in medical AI

ViLMedic：医学人工智能中视觉和语言交叉研究的框架

论文链接：https://aclanthology.org/2022.acl-demo.3/

数据集

Dataset Debt in Biomedical Language Modeling

生物医学语言建模中的数据集债务

论文链接：https://aclanthology.org/2022.bigscience-1.10/

BanglaBioMed: A Biomedical Named-Entity Annotated Corpus for Bangla (Bengali)

BanglaBioMed：Bangla（孟加拉语）的生物医学命名实体注释语料库

论文链接：https://aclanthology.org/2022.bionlp-1.31/

对话

Incorporating Medical Knowledge to Transformer-based Language Models for Medical Dialogue Generation

将医学知识结合到基于 Transformer 的语言模型中以生成医学对话

论文地址：https://aclanthology.org/2022.bionlp-1.10/

Conversational Bots for Psychotherapy: A Study of Generative Transformer Models Using Domain-specific Dialogues

用于心理治疗的对话机器人：使用特定领域对话的生成式变压器模型的研究

论文链接：https://aclanthology.org/2022.bionlp-1.27/

Doctor XAvIer: Explainable Diagnosis on Physician-Patient Dialogues and XAI Evaluation

XAvIer 医生：医患对话和 XAI 评估的可解释诊断

论文链接：https://aclanthology.org/2022.bionlp-1.33/

QA

Explainable Assessment of Healthcare Articles with QA

使用 QA 对医疗保健文章进行可解释的评估

论文链接：https://aclanthology.org/2022.bionlp-1.1/

Data Augmentation for Biomedical Factoid Question Answering

生物医学事实问答的数据增强

论文链接：https://aclanthology.org/2022.bionlp-1.6/

Overview of the MedVidQA 2022 Shared Task on Medical Video Question-Answering

MedVidQA 2022 医学视频问答共享任务概述

论文链接：https://aclanthology.org/2022.bionlp-1.25/

信息抽取

A sequence-to-sequence approach for document-level relation extraction

一种用于文档级关系提取的序列到序列方法

论文链接：https://aclanthology.org/2022.bionlp-1.2/

Slot Filling for Biomedical Information Extraction

用于生物医学信息提取的槽填充

论文链接：https://aclanthology.org/2022.bionlp-1.7/

Simple Semantic-based Data Augmentation for Named Entity Recognition in Biomedical Texts

用于生物医学文本中命名实体识别的简单基于语义的数据增强

论文链接：https://aclanthology.org/2022.bionlp-1.12/

Auxiliary Learning for Named Entity Recognition with Multiple Auxiliary Biomedical Training Data

具有多个辅助生物医学训练数据的命名实体识别辅助学习

论文链接：https://aclanthology.org/2022.bionlp-1.13/

Biomedical NER using Novel Schema and Distant Supervision

使用新模式和远程监督的生物医学 NER

论文链接：https://aclanthology.org/2022.bionlp-1.15/

Improving Supervised Drug-Protein Relation Extraction with Distantly Supervised Models

使用远程监督模型改进监督药物-蛋白质关系提取

论文链接:https://aclanthology.org/2022.bionlp-1.16/

Named Entity Recognition for Cancer Immunology Research Using Distant Supervision

使用远程监督的癌症免疫学研究的命名实体识别

论文链接：https://aclanthology.org/2022.bionlp-1.17/

Intra-Template Entity Compatibility based Slot-Filling for Clinical Trial Information Extraction

用于临床试验信息提取的基于模板内实体兼容性的插槽填充

论文链接：https://aclanthology.org/2022.bionlp-1.18/

Improving Romanian BioNER Using a Biologically Inspired System

使用仿生系统改进罗马尼亚 BioNER

论文链接：https://aclanthology.org/2022.bionlp-1.30/

DISTANT-CTO: A Zero Cost, Distantly Supervised Approach to Improve Low-Resource Entity Extraction Using Clinical Trials Literature

DISTANT-CTO：使用临床试验文献改进低资源实体提取的零成本、远程监督方法

论文链接：https://aclanthology.org/2022.bionlp-1.34/

Extraction of Diagnostic Reasoning Relations for Clinical Knowledge Graphs

临床知识图诊断推理关系的提取

论文链接：https://aclanthology.org/2022.acl-srw.33/

MIMICause: Representation and automatic extraction of causal relation types from clinical notes

MIMICause：从临床记录中表示和自动提取因果关系类型

论文链接：https://aclanthology.org/2022.findings-acl.63/

事件抽取

Low Resource Causal Event Detection from Biomedical Literature

来自生物医学文献的低资源因果事件检测

论文链接：https://aclanthology.org/2022.bionlp-1.24/

BEEDS: Large-Scale Biomedical Event Extraction using Distant Supervision and Question Answering

BEEDS：使用远程监督和问答的大规模生物医学事件提取

论文链接：https://aclanthology.org/2022.bionlp-1.28/

Comparing Encoder-Only and Encoder-Decoder Transformers for Relation Extraction from Biomedical Texts: An Empirical Study on Ten Benchmark Datasets

比较仅编码器和编码器-解码器转换器从生物医学文本中提取关系：对十个基准数据集的实证研究

论文链接：https://aclanthology.org/2022.bionlp-1.37/

其他

How You Say It Matters: Measuring the Impact of Verbal Disfluency Tags on Automated Dementia Detection

你怎么说它很重要：测量语言不流畅标签对自动痴呆症检测的影响

论文链接：https://aclanthology.org/2022.bionlp-1.4/

Automatic Biomedical Term Clustering by Learning Fine-grained Term Representations

通过学习细粒度术语表示的自动生物医学术语聚类

论文链接：https://aclanthology.org/2022.bionlp-1.8/

SNP2Vec: Scalable Self-Supervised Pre-Training for Genome-Wide Association Study

SNP2Vec：用于全基因组关联研究的可扩展自我监督预训练

论文链接：https://aclanthology.org/2022.bionlp-1.14/

Few-Shot Cross-lingual Transfer for Coarse-grained De-identification of Code-Mixed Clinical Texts

用于代码混合临床文本的粗粒度去识别的 Few-Shot 跨语言迁移

论文链接：https://aclanthology.org/2022.bionlp-1.20/

VPAI_Lab at MedVidQA 2022: A Two-Stage Cross-modal Fusion Method for Medical Instructional Video Classification

MedVidQA 2022 上的 VPAI_Lab：用于医学教学视频分类的两阶段跨模式融合方法

论文链接：https://aclanthology.org/2022.bionlp-1.21/

GenCompareSum: a hybrid unsupervised summarization method using salience

GenCompareSum：一种使用显着性的混合无监督摘要方法

论文链接：https://aclanthology.org/2022.bionlp-1.22/

BioCite: A Deep Learning-based Citation Linkage Framework for Biomedical Research Articles

BioCite：基于深度学习的生物医学研究文章引用链接框架

论文链接：https://aclanthology.org/2022.bionlp-1.23/

Inter-annotator agreement is not the ceiling of machine learning performance: Evidence from a comprehensive set of simulations

注释者间协议不是机器学习性能的天花板：来自一组全面模拟的证据

论文链接：https://aclanthology.org/2022.bionlp-1.26/

Data Augmentation for Rare Symptoms in Vaccine Side-Effect Detection

疫苗副作用检测中罕见症状的数据增强

论文链接：https://aclanthology.org/2022.bionlp-1.29/

EchoGen: Generating Conclusions from Echocardiogram Notes

EchoGen：从超声心动图笔记中得出结论

论文链接：https://aclanthology.org/2022.bionlp-1.35/

Quantifying Clinical Outcome Measures in Patients with Epilepsy Using the Electronic Health Record

用电子健康记录量化癫痫患者的临床结果测量

论文链接：https://aclanthology.org/2022.bionlp-1.36/

Utility Preservation of Clinical Text After De-Identification

去识别后临床文本的实用保存

论文链接：https://aclanthology.org/2022.bionlp-1.38/

Towards Automatic Curation of Antibiotic Resistance Genes via Statement Extraction from Scientific Papers: A Benchmark Dataset and Models

通过从科学论文中提取语句来自动管理抗生素耐药性基因：基准数据集和模型

论文链接：https://aclanthology.org/2022.bionlp-1.40/

Towards Generalizable Methods for Automating Risk Score Calculation

迈向自动化风险评分计算的通用方法

论文链接：https://aclanthology.org/2022.bionlp-1.42/

DoSSIER at MedVidQA 2022: Text-based Approaches to Medical Video Answer Localization Problem

MedVidQA 2022 上的 DoSSIER：基于文本的医学视频答案定位问题方法

论文链接：https://aclanthology.org/2022.bionlp-1.43/

Investigating the Medical Coverage of a Translation System into Pictographs for Patients with an Intellectual Disability

调查翻译系统的医疗覆盖范围为智障患者的象形文字

论文链接：https://aclanthology.org/2022.slpat-1.6/

Predicting Intervention Approval in Clinical Trials through Multi-Document Summarization

通过多文档摘要预测临床试验中的干预批准

论文链接：https://aclanthology.org/2022.acl-long.137/

Improving the Generalizability of Depression Detection by Leveraging Clinical Questionnaires

利用临床问卷提高抑郁症检测的普遍性

论文链接：https://aclanthology.org/2022.acl-long.578/

RuCCoN: Clinical Concept Normalization in Russian

RuCCoN：俄语临床概念标准化

论文链接：https://aclanthology.org/2022.findings-acl.21/