医学图像配准
链接: https://pan.baidu.com/s/19xrZg_K4JLF-nq-Iq8vY8A 提取码: 5ykr
包含的医学图像配准算法:
- 一般的刚性变换
- 非刚性变换:B样条弹性配准
- 非刚性变换: 多模态非刚性图像配准算法:非刚性二维和三维图像配准与DEMON(流体)算法,扩展模式转换。
以下是B样条弹性配准源代码(matlab实现):
先解压此文件
后直接修改以下三个文件(每个文件分别是一种模式)中的图片位置即可
% Example using lsqnonlin optimizer and registration error image
% instead of value.
% clean
clear all; close all; clc;
% Read two greyscale images of Lena
I1=im2double(imread('test1.png'));
I2=im2double(imread('test3.png'));
% b-spline grid spacing in x and y direction
Spacing=[32 32];
% Type of registration error used see registration_error.m
type='d';
% Make the Initial b-spline registration grid
[O_trans]=make_init_grid(Spacing,size(I1));
% Convert all values tot type double
I1=double(I1); I2=double(I2); O_trans=double(O_trans);
% Smooth both images for faster registration
I1s=imfilter(I1,fspecial('gaussian',[20 20],5));
I2s=imfilter(I2,fspecial('gaussian',[20 20],5));
% Optimizer parameters
optim=optimset('Display','iter','MaxIter',40);
% Reshape O_trans from a matrix to a vector.
sizes=size(O_trans); O_trans=O_trans(:);
% Start the b-spline nonrigid registration optimizer
O_trans = lsqnonlin(@(x)bspline_registration_image(x,sizes,Spacing,I1s,I2s,type),O_trans,[],[],optim);
% Reshape O_trans from a vector to a matrix
O_trans=reshape(O_trans,sizes);
% Transform the input image with the found optimal grid.
Icor=bspline_transform(O_trans,I1,Spacing);
% Make a (transformed) grid image
Igrid=make_grid_image(Spacing,size(I1));
Igrid=bspline_transform(O_trans,Igrid,Spacing);
% Show the registration results
figure,
subplot(2,2,1), imshow(I1); title('input image 1');
subplot(2,2,2), imshow(I2); title('input image 2');
subplot(2,2,3), imshow(Icor); title('transformed image 1');
subplot(2,2,4), imshow(Igrid); title('grid');
实验结果: