目录
环境
(1)Ubuntu18.04
(2)服务器:omero.server
(3)Web端:omero.py(推荐),也可在omero.server的基础上安装(但环境容易弄混)
(4)版本:
omero:5.5.1
Python>= 2.7.9(2.7.*)
Django:1.8
Numpy>=1.9
Java:jdk-1.8.0
Ice:3.6
Psql:10或以上
Nginx:1.12或以上
一、服务器安装
1.环境安装
以下所有软件若装不了建议直接官网下载软件包安装
1)Java,ice,python(2.7)
$apt-get update
#installed for convenience
$apt-get -y install unzip wget bc
#to be installed if recommended/suggested is false
$apt-get -y install cron
#install Java
$apt-get update -q
$apt-get install -y openjdk-8-jre
#install dependencies
$apt-get update
$apt-get -y install \
unzip \
wget \
python-{pip,tables,virtualenv,yaml,jinja2}
#to be installed if recommended/suggested is false
$apt-get -y install python-setuptools python-wheel virtualenv
2)
$apt-get -y install zlib1g-dev
$apt-get -y install python-{pillow,numpy}
3)一个个的装依赖
$apt-get update && \
$apt-get install -y -q \
build-essential \
db5.3-util \
libbz2-dev \
libdb++-dev \
libdb-dev \
libexpat-dev \
libmcpp-dev \
libssl-dev \
mcpp \
zlib1g-dev
$cd /tmp
$wget -q https://github.com/ome/zeroc-ice-ubuntu1804/releases/download/0.1.0/Ice-3.6.4-ubuntu1804-amd64.tar.xz
$tar xf Ice-3.6.4-ubuntu1804-amd64.tar.xz
$mv opt/Ice-3.6.4 /opt
$pip install https://github.com/ome/zeroc-ice-ubuntu1804/releases/download/0.1.0/zeroc_ice-3.6.4-cp27-cp27mu-linux_x86_64.whl
$echo /opt/Ice-3.6.4/lib/x86_64-linux-gnu >/etc/ld.so.conf.d/ice-x86_64.conf
$ldconfig
4)使ice对于所有用户都可用:
$cat omero-ice36.env >> /etc/profile
$apt-get update
$apt-get -y install postgresql
$service postgresql start
2.服务器安装
(即omero.server。1或2都可)
1)