人工蜂群算法python_python实现人工蜂群算法

ABSIndividual.py

import numpy as np

import ObjFunction

class ABSIndividual:

'''

individual of artificial bee swarm algorithm

'''

def __init__(self, vardim, bound):

'''

vardim: dimension of variables

bound: boundaries of variables

'''

self.vardim = vardim

self.bound = bound

self.fitness = 0.

self.trials = 0

def generate(self):

'''

generate a random chromsome for artificial bee swarm algorithm

'''

len = self.vardim

rnd = np.random.random(size=len)

self.chrom = np.zeros(len)

for i in xrange(0, len):

self.chrom[i] = self.bound[0, i] + \

(self.bound[1, i] - self.bound[0, i]) * rnd[i]

def calculateFitness(self):

'''

calculate the fitness of the chromsome

'''

self.fitness = ObjFunction.GrieFunc(

self.vardim, self.chrom, self.bound)

ABS.py

import numpy as np

from ABSIndividual import ABSIndividual

import random

import copy

import matplotlib.pyplot as plt

class ArtificialBeeSwarm:

'''

the class for artificial bee swarm algorithm

'''

def __init__(self, sizepop, vardim, bound, MAXGEN, params):

'''

sizepop: population sizepop

vardim: dimension of variables

bound: boundaries of variables

MAXGEN: termination condition

params: algorithm required parameters, it is a list which is consisting of[trailLimit, C]

'''

self.sizepop = sizepop

self.vardim = vardim

self.bound = bound

self.foodSource = self.sizepop / 2

self.MAXGEN = MAXGEN

self.params = params

self.population = []

self.fitness = np.zeros((self.sizepop, 1))

self.trace = np.zeros((self.MAXGEN, 2))

def initialize(self):

'''

initialize the population of abs

'''

for i in xrange(0, self.foodSource):

ind = ABSIndividual(self.vardim, self.bound)

ind.generate()

self.population.append(ind)

def evaluation(self):

'''

evaluation the fitness of the population

'''

for i in xrange(0, self.foodSource):

self.population[i].calculateFitness()

self.fitness[i] = self.population[i].fitness

def employedBeePhase(self):

'''

employed bee phase

'''

for i in xrange(0, self.foodSource):

k = np.random.random_integers(0, self.vardim - 1)

j = np.random.random_integers(0, self.foodSource - 1)

while j == i:

j = np.random.random_integers(0, self.foodSource - 1)

vi = copy.deepcopy(self.population[i])

# vi.chrom = vi.chrom + np.random.uniform(-1, 1, self.vardim) * (

# vi.chrom - self.population[j].chrom) + np.random.uniform(0.0, self.params[1], self.vardim) * (self.best.chrom - vi.chrom)

# for k in xrange(0, self.vardim):

# if vi.chrom[k] < self.bound[0, k]:

# vi.chrom[k] = self.bound[0, k]

# if vi.chrom[k] > self.bound[1, k]:

# vi.chrom[k] = self.bound[1, k]

vi.chrom[

k] += np.random.uniform(low=-1, high=1.0, size=1) * (vi.chrom[k] - self.population[j].chrom[k])

if vi.chrom[k] < self.bound[0, k]:

vi.chrom[k] = self.bound[0, k]

if vi.chrom[k] > self.bound[1, k]:

vi.chrom[k] = self.bound[1, k]

vi.calculateFitness()

if vi.fitness > self.fitness[fi]:

self.population[fi] = vi

self.fitness[fi] = vi.fitness

if vi.fitness > self.best.fitness:

self.best = vi

vi.calculateFitness()

if vi.fitness > self.fitness[i]:

self.population[i] = vi

self.fitness[i] = vi.fitness

if vi.fitness > self.best.fitness:

self.best = vi

else:

self.population[i].trials += 1

def onlookerBeePhase(self):

'''

onlooker bee phase

'''

accuFitness = np.zeros((self.foodSource, 1))

maxFitness = np.max(self.fitness)

for i in xrange(0, self.foodSource):

accuFitness[i] = 0.9 * self.fitness[i] / maxFitness + 0.1

for i in xrange(0, self.foodSource):

for fi in xrange(0, self.foodSource):

r = random.random()

if r < accuFitness[i]:

k = np.random.random_integers(0, self.vardim - 1)

j = np.random.random_integers(0, self.foodSource - 1)

while j == fi:

j = np.random.random_integers(0, self.foodSource - 1)

vi = copy.deepcopy(self.population[fi])

# vi.chrom = vi.chrom + np.random.uniform(-1, 1, self.vardim) * (

# vi.chrom - self.population[j].chrom) + np.random.uniform(0.0, self.params[1], self.vardim) * (self.best.chrom - vi.chrom)

# for k in xrange(0, self.vardim):

# if vi.chrom[k] < self.bound[0, k]:

# vi.chrom[k] = self.bound[0, k]

# if vi.chrom[k] > self.bound[1, k]:

# vi.chrom[k] = self.bound[1, k]

vi.chrom[

k] += np.random.uniform(low=-1, high=1.0, size=1) * (vi.chrom[k] - self.population[j].chrom[k])

if vi.chrom[k] < self.bound[0, k]:

vi.chrom[k] = self.bound[0, k]

if vi.chrom[k] > self.bound[1, k]:

vi.chrom[k] = self.bound[1, k]

vi.calculateFitness()

if vi.fitness > self.fitness[fi]:

self.population[fi] = vi

self.fitness[fi] = vi.fitness

if vi.fitness > self.best.fitness:

self.best = vi

else:

self.population[fi].trials += 1

break

def scoutBeePhase(self):

'''

scout bee phase

'''

for i in xrange(0, self.foodSource):

if self.population[i].trials > self.params[0]:

self.population[i].generate()

self.population[i].trials = 0

self.population[i].calculateFitness()

self.fitness[i] = self.population[i].fitness

def solve(self):

'''

the evolution process of the abs algorithm

'''

self.t = 0

self.initialize()

self.evaluation()

best = np.max(self.fitness)

bestIndex = np.argmax(self.fitness)

self.best = copy.deepcopy(self.population[bestIndex])

self.avefitness = np.mean(self.fitness)

self.trace[self.t, 0] = (1 - self.best.fitness) / self.best.fitness

self.trace[self.t, 1] = (1 - self.avefitness) / self.avefitness

print("Generation %d: optimal function value is: %f; average function value is %f" % (

self.t, self.trace[self.t, 0], self.trace[self.t, 1]))

while self.t < self.MAXGEN - 1:

self.t += 1

self.employedBeePhase()

self.onlookerBeePhase()

self.scoutBeePhase()

best = np.max(self.fitness)

bestIndex = np.argmax(self.fitness)

if best > self.best.fitness:

self.best = copy.deepcopy(self.population[bestIndex])

self.avefitness = np.mean(self.fitness)

self.trace[self.t, 0] = (1 - self.best.fitness) / self.best.fitness

self.trace[self.t, 1] = (1 - self.avefitness) / self.avefitness

print("Generation %d: optimal function value is: %f; average function value is %f" % (

self.t, self.trace[self.t, 0], self.trace[self.t, 1]))

print("Optimal function value is: %f; " % self.trace[self.t, 0])

print "Optimal solution is:"

print self.best.chrom

self.printResult()

def printResult(self):

'''

plot the result of abs algorithm

'''

x = np.arange(0, self.MAXGEN)

y1 = self.trace[:, 0]

y2 = self.trace[:, 1]

plt.plot(x, y1, 'r', label='optimal value')

plt.plot(x, y2, 'g', label='average value')

plt.xlabel("Iteration")

plt.ylabel("function value")

plt.title("Artificial Bee Swarm algorithm for function optimization")

plt.legend()

plt.show()

运行程序：

if __name__ == "__main__":

bound = np.tile([[-600], [600]], 25)

abs = ABS(60, 25, bound, 1000, [100, 0.5])

abs.solve()