使用程序读写hdf5文件报错 OSError: [Errno 37] Unable to synchronously create file

使用程序读写hdf5文件报错 OSError: [Errno 37] Unable to synchronously create file (unable to lock file, errno = 37, error message = ‘No locks available’)

测试python程序

import h5py 
import numpy as np
data_matrix = np.random.uniform(-1, 1, size=(2, 2))

# Write data to HDF5
data_file = h5py.File('file.hdf5', 'w')
data_file.create_dataset('group_name', data=data_matrix)
data_file.close()

filename = 'file.hdf5'
f = h5py.File(filename, 'r')

# List all groups
print("Keys: %s" % f.keys())
a_group_key = list(f.keys())[0]

# Get the data
data = list(f[a_group_key])
print(data)

运行后，报错

Traceback (most recent call last):
  File "/opt/data/private/hdf_test/test.py", line 6, in <module>
    data_file = h5py.File('file.hdf5', 'w')
  File "/opt/conda/lib/python3.10/site-packages/h5py/_hl/files.py", line 562, in __init__
    fid = make_fid(name, mode, userblock_size, fapl, fcpl, swmr=swmr)
  File "/opt/conda/lib/python3.10/site-packages/h5py/_hl/files.py", line 241, in make_fid
    fid = h5f.create(name, h5f.ACC_TRUNC, fapl=fapl, fcpl=fcpl)
  File "h5py/_objects.pyx", line 54, in h5py._objects.with_phil.wrapper
  File "h5py/_objects.pyx", line 55, in h5py._objects.with_phil.wrapper
  File "h5py/h5f.pyx", line 122, in h5py.h5f.create
OSError: [Errno 37] Unable to synchronously create file (unable to lock file, errno = 37, error message = 'No locks available')

解决方法：
在终端输入：

export HDF5_USE_FILE_LOCKING=FALSE

再次运行程序返回：

root@interactive90765:/opt/data/private/hdf_test# python test.py 
Keys: <KeysViewHDF5 ['group_name']>
[array([ 0.68818786, -0.35534535]), array([-0.99607473, -0.23781375])]

如果通过VSCODE或者PyCharm 客户端远程连接服务器调试程序，需要断开重新连接后，再跑程序。

以上添加只是临时生效，需要永久生效可以将 export HDF5_USE_FILE_LOCKING=FALSE 添加到 .bashrc 后永久生效。