实验数据集
隐形眼镜数据集
实验代码
DecisionTree.py
import operator
from math import log
def calcShannonEnt(dataSet):
numEntries = len(dataSet) #数据集长度
labelCounts = {} #创建标签字典
for featVec in dataSet: #按行遍历数据集
currentLabel = featVec[-1] #最后一列是标签
if currentLabel not in labelCounts.keys(): #如果标签不在字典中则创建一个字典元素
labelCounts[currentLabel] = 0
labelCounts[currentLabel] += 1 #存在该字典元素则标签出现次数+1
shannonEnt = 0.0 #香农熵
for key in labelCounts:
prob = float(labelCounts[key])/numEntries #标签数量占比
shannonEnt -= prob * log(prob, 2) #计算香农熵,所有类别所有可能包含的信息期望值
return shannonEnt
def createDataSet():
dataSet = [[1, 1, 'yes'],
[1, 1, 'yes'],
[1, 0, 'no'],
[0, 1, 'no'],
[0, 1, 'no']
]
labels = ['no surfacing', 'flippers']
return dataSet, labels
"""
输入参数:
dataSet : 总数据集
axis : 数据集的第几列特征
value: 以及该特征值划分
"""
def splitDataSet(dataSet, axis, value):
retDataSet = []
for featVec in dataSet:
if featVec[axis] == value:
reducedFeatVec = featVec[:axis]
reducedFeatVec.extend(featVec[axis + 1:]) #刨除划分数据集的列特征
retDataSet.append(reducedFeatVec)
return retDataSet
def chooseBestFeatureToSplit(dataSet):
numFeatures = len(dataSet[0]) - 1
baseEntropy = calcShannonEnt(dataSet) #计算总的香农熵
bestInfoGain = 0.0 #最佳信息增益
bestFeature = -1 #最佳特征
for i in range(numFeatures):
featList = [example[i] for example in dataSet] #获取第i列元素
uniqueVals = set(featList)
newEntropy = 0.0
for value in uniqueVals:
subDataSet = splitDataSet(dataSet, i, value) #划分子数据集
prob = len(subDataSet)/float(len(dataSet))
newEntropy += prob * calcShannonEnt(subDataSet) #计算划分子集后的香农熵
infoGain = baseEntropy - newEntropy #计算信息增益
if(infoGain > bestInfoGain):
bestInfoGain = infoGain
bestFeature = i
return bestFeature
def majorityCnt(classList):
classCount = {}
for vote in classList:
if vote not in classCount.keys():
classCount[vote] = 0
classCount[vote] += 1
sortedClassCount = sorted(classCount.iteritems(), key=operator.itemgetter(1), reverse=True)
return sortedClassCount[0][0]
def createTree(dataSet, labels):
classList = [example[-1] for example in dataSet] #创建标签列表
if classList.count(classList[0]) == len(classList): #标签列表中标签都一致则递归结束
return classList[0]
if len(dataSet[0]) == 1: #如果数据集特征都用完了还标签还不一致
return majorityCnt(classList) #投票选择一个出现次数最多的标签值
bestFeat = chooseBestFeatureToSplit(dataSet) #选择最佳特征进行划分数据集
bestFeatLabel = labels[bestFeat]
myTree = {bestFeatLabel: {}}
del(labels[bestFeat])
featValues = [example[bestFeat] for example in dataSet]
uniqueVals = set(featValues)
for value in uniqueVals:
subLabels = labels[:]
myTree[bestFeatLabel][value] = createTree(splitDataSet(dataSet, bestFeat, value), subLabels)
return myTree
PlotDecisionTree.py
import matplotlib.pyplot as plt
import DecisionTree as trees
decisionNode = dict(boxstyle='sawtooth', fc='0.8') #sawtooth样式
leafNode = dict(boxstyle='round4', fc='0.8') #round4样式
arrow_args = dict(arrowstyle='<-') #箭头样式
"""
annotate 参数说明
xy 箭头起始点
xytext 箭头终点
text 节点上注释的文本
xycoords/textcoords 定义了xy、xytext的坐标系统 默认值 figure fraction
va\ha 定义文本的对齐方式 va垂直高度 ha水平高度
arrowprops 定义箭头的样式
bbox 字典 用于定义注释框的样式
"""
def plotNode(nodeTxt, centerPt, parentPt, nodeType):
createPlot.ax1.annotate(nodeTxt, xy=parentPt, xycoords='axes fraction'
, xytext=centerPt, textcoords='axes fraction',
va='center', ha='center', bbox=nodeType, arrowprops=arrow_args)
def getNumLeafs(myTree):
numLeafs = 0
firstStr = list(myTree.keys())[0]
secondDict = myTree[firstStr]
for key in secondDict.keys():
if type(secondDict[key]).__name__ == 'dict':
numLeafs += getNumLeafs(secondDict[key])
else:
numLeafs += 1
return numLeafs
def getTreeDepth(myTree):
maxDepth = 0
firstStr = list(myTree.keys())[0]
secondDict = myTree[firstStr]
for key in secondDict.keys():
if type(secondDict[key]).__name__ == 'dict':
thisDepth = 1 + getTreeDepth(secondDict[key])
else:
thisDepth = 1
if thisDepth > maxDepth : maxDepth = thisDepth
return maxDepth
def retrieveTree(i):
listOfTrees = [{'no surfacing': {0: 'no', 1: {'flippers': {0: 'no', 1: 'yes'}}}},
{'no surfacing': {0: 'no', 1: {'flippers': {0: {'head': {0: 'no', 1: 'yes'}},1: 'no'}}}}
]
return listOfTrees[i]
def plotMidText(cntrPt, parentPt, txtString): #箭头线中间填充值
xMid = (parentPt[0] - cntrPt[0])/2.0 + cntrPt[0]
yMid = (parentPt[1] - cntrPt[1])/2.0 + cntrPt[1]
createPlot.ax1.text(xMid, yMid, txtString)
def plotTree(myTree, parentPt, nodeTxt):
numLeafs = getNumLeafs(myTree) #节点数量
depth = getTreeDepth(myTree) #树深度
firstStr = list(myTree.keys())[0] #当前树头节点键
cntrPt = (plotTree.xOff + (1.0 + float(numLeafs))/2.0/plotTree.totalW, plotTree.yOff) #子节点
plotMidText(cntrPt, parentPt, nodeTxt) #绘制箭头线中间数值
plotNode(firstStr, cntrPt, parentPt, decisionNode) #绘制节点以及箭头线
secondDict = myTree[firstStr] #获取子节点
plotTree.yOff = plotTree.yOff - 1.0/plotTree.totalD #减少y偏移
for key in secondDict.keys():
if type(secondDict[key]).__name__ == 'dict': #如果值是一个字典的话需要递归绘制子树
plotTree(secondDict[key], cntrPt, str(key))
else: #如果是值的话则直接绘制树节点
plotTree.xOff = plotTree.xOff + 1.0/plotTree.totalW
plotNode(secondDict[key], (plotTree.xOff, plotTree.yOff), cntrPt, leafNode)
plotMidText((plotTree.xOff, plotTree.yOff), cntrPt, str(key))
plotTree.yOff = plotTree.yOff + 1.0/plotTree.totalD
def createPlot(inTree):
fig = plt.figure(1, facecolor='white')
fig.clf()
axprops = dict(xticks=[], yticks=[])
createPlot.ax1 = plt.subplot(111, frameon=False, **axprops)
plotTree.totalW = float(getNumLeafs(inTree))
plotTree.totalD = float(getTreeDepth(inTree))
plotTree.xOff = -0.5/plotTree.totalW
plotTree.yOff = 1.0
plotTree(inTree, (0.5, 1.0), '')
plt.show()
def classify(inputTree, featLabels, testVec):
firstStr = list(inputTree.keys())[0]
secondDict = inputTree[firstStr]
featIndex = featLabels.index(firstStr)
for key in secondDict.keys():
if testVec[featIndex] == key:
if type(secondDict[key]).__name__ == 'dict':
classLabel = classify(secondDict[key], featLabels, testVec)
else:
classLabel = secondDict[key]
return classLabel
#二进制序列化写入
def storeTree(inputTree, filename):
import pickle
fw = open(filename, 'wb')
pickle.dump(inputTree, fw)
fw.close()
#二进制序列化读入
def grabTree(filename):
import pickle
fr = open(filename, 'rb')
tree = pickle.load(fr)
fr.close()
return tree
def plotLensesTree():
fr = open('lenses.txt')
lenses = [inst.strip().split('\t') for inst in fr.readlines()]
lensesLabels = ['age', 'prescript', 'astigmatic', 'tearRate']
trees.createTree(lenses, lensesLabels)
plotLensesTree()