寻找AIV_H5_HA_chicken 的选择性扫描区

bash
(base) zexing@DNA:~/projects/xieruyu/OmegaPlus_v2.2.2_Linux$ ./OmegaPlus -name H5_HA_chicken_omega.fasta -input H5_HA_chicken_alignment_web.fasta -minwin 100 -maxwin 1000 -grid 1772 -impute N -seed 6


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                                         OmegaPlus
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 OmegaPlus version 2.2.2 released by Nikolaos Alachiotis and Pavlos Pavlidis in January 2013.


 Command:

         ./OmegaPlus -name H5_HA_chicken_omega.fasta -input H5_HA_chicken_alignment_web.fasta -minwin 100 -maxwin 1000 -grid 1772 -impute N -seed 6


 Gap (-) imputation:                    OFF
 Ambiguous character (N) imputation:    ON
 Omega search strategy:                 Exhaustive
 Alignment deduction to binary:         OFF


 Alignment 1
                Sequences:              258
                Sites:                  1777
                Discarded sites:        1250

                Processing...

                Elapsed time:           0.675799 seconds


 Total elapsed time 0.676925 seconds.