安装 R 后,如果你想安装 rJava,可能会遇到一个问题
configure:4130: error: Cannot compile a simple JNI program. See config.log for details.
打开 config.log
interpreter : '/usr/lib64/jvm/java/jre/bin/java'
archiver : '/usr/lib64/jvm/java/bin/jar'
compiler : '/usr/lib64/jvm/java/bin/javac'
header prep.: '/usr/lib64/jvm/java/bin/javah'
cpp flags : '-I/usr/lib64/jvm/java/include'
java libs : '-L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default -L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64 -L -L/usr/lib -ljvm'
configure:4090: checking whether JNI programs can be compiled
configure:4108: gcc -std=gnu99 -o conftest -g -O2 -I/usr/lib64/jvm/java/include conftest.c -L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default -L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64 -L -L/usr/lib -ljvm >&5
/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default/libjvm.so: undefined reference to `dlsym'
/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default/libjvm.so: undefined reference to `dlerror'
/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default/libjvm.so: undefined reference to `dladdr'
/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default/libjvm.so: undefined reference to `dlopen'
/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default/libjvm.so: undefined reference to `dlclose'
collect2: ld returned 1 exit status
configure:4114: $? = 1
configure: failed program was:
|
| #include <jni.h>
| int main(void) {
| jobject o;
| JNI_CreateJavaVM(0, 0, 0);
| return 0;
| }
|
configure:4130: error: Cannot compile a simple JNI program. See config.log for details.
你会发现
undefined reference to ...
的问题。
在Google上搜索答案,会要你去解决 libdl.so ,可问题是,你可以跳过这个库 。
很简单
手动的修改 R 的配置:
JAVA_LIBS='-L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default -L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64 -L -L/usr/lib -ljvm'
改为
JAVA_LIBS='-L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default -L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64 -L -L/usr/lib -ljvm -ldl'
通过加上 (LDFLAGS =) -ldl ,就可以跳过 libdl.so, 然后就不会出这个纠结的问题了。