无法安装 rJava 的解决方法

安装 R 后，如果你想安装 rJava，可能会遇到一个问题

configure:4130: error: Cannot compile a simple JNI program. See config.log for details.

打开 config.log

interpreter : '/usr/lib64/jvm/java/jre/bin/java'
archiver    : '/usr/lib64/jvm/java/bin/jar'
compiler    : '/usr/lib64/jvm/java/bin/javac'
header prep.: '/usr/lib64/jvm/java/bin/javah'
cpp flags   : '-I/usr/lib64/jvm/java/include'
java libs   : '-L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default -L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64 -L -L/usr/lib -ljvm'
configure:4090: checking whether JNI programs can be compiled
configure:4108: gcc -std=gnu99 -o conftest -g -O2 -I/usr/lib64/jvm/java/include   conftest.c  -L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default -L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64 -L -L/usr/lib -ljvm >&5
/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default/libjvm.so: undefined reference to `dlsym'
/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default/libjvm.so: undefined reference to `dlerror'
/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default/libjvm.so: undefined reference to `dladdr'
/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default/libjvm.so: undefined reference to `dlopen'
/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default/libjvm.so: undefined reference to `dlclose'
collect2: ld returned 1 exit status
configure:4114: $? = 1
configure: failed program was:
|
| #include <jni.h>
| int main(void) {
|     jobject o;
|     JNI_CreateJavaVM(0, 0, 0);
|     return 0;
| }
|
configure:4130: error: Cannot compile a simple JNI program. See config.log for details.

你会发现

undefined reference to ...

的问题。

在Google上搜索答案，会要你去解决 libdl.so ，可问题是，你可以跳过这个库 。

很简单

手动的修改 R 的配置：

JAVA_LIBS='-L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default -L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64 -L -L/usr/lib -ljvm'

改为

JAVA_LIBS='-L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64/default -L/usr/lib64/jvm/java-1_6_0-ibm-1.6.0/jre/lib/amd64 -L -L/usr/lib -ljvm -ldl'

通过加上 （LDFLAGS =） -ldl ，就可以跳过 libdl.so， 然后就不会出这个纠结的问题了。