wrf-hydro环境部署和运行测试

一、检查编译器

该项目所需编译器为gcc、g++、gfortran，可以使用如下which命令进行检查

which gcc
which g++
which gfortran

如果未安装，可执行以下命令进行安装

sudo apt install build-essential
sudo apt-get install gfortran

如果安装失败，可以试试先更新apt

二、安装依赖库

1.下载之前先编辑环境变量：

vim ~/.bashrc

在~/.bashrc环境变量内的最后一行添加如下环境变量

#zlib_env
export INCLUDE=/home/wrfhydro/zlib/include:$INCLUDE
export LD_LIBRARY_PATH=/home/wrfhydro/zlib/lib:$LD_LIBRARY_PATH

#mpich_env
export PATH=/home/wrfhydro/mpich/bin:$PATH
export INCLUDE=/home/wrfhydro/mpich/include:$INCLUDE
export LD_LIBRARY_PATH=/home/wrfhydro/mpich/lib:$LD_LIBRARY_PATH

#hdf5_env
export PATH=/home/wrfhydro/hdf5/bin:$PATH
export INCLUDE=/home/wrfhydro/hdf5/include:$INCLUDE
export LD_LIBRARY_PATH=/home/wrfhydro/hdf5/lib:$LD_LIBRARY_PATH

#netcdf_env
export PATH=/home/wrfhydro/netcdf/bin:$PATH
export INCLUDE=/home/wrfhydro/netcdf/include:$INCLUDE
export LD_LIBRARY_PATH=/home/wrfhydro/netcdf/lib:$LD_LIBRARY_PATH
export NETCDF=/home/wrfhydro/netcdf

添加完环境变量后使用source命令初始化修改后的文件

#更新~/.bashrc文件
source ~/.bashrc

注：作者的依赖库均是在windows系统下安装，再通过FinallShell传输到linux系统上的

2.安装zlib-1.2.13

tar zxvf zlib-1.2.13.tar.gz
cd zlib-1.2.13
./configure --prefix=/home/wrfhydro/zlib
make
sudo make install

3.安装hdf5-1.13.2

tar zxvf hdf5-1.13.2.tar.gz
cd hdf5-1.13.2
./configure --prefix=/home/wrfhydro/hdf5 --with-zlib=/home/wrfhydro/zlib --enable-fortran --enable-cxx
make
sudo make install

4.安装mpich-4.0.2

tar zxvf mpich-4.0.2.tar.gz
cd mpich-4.0.2
./configure --prefix=/home/wrfhydro/mpich
make
sudo make install

5.安装netcdf-c-4.9.0

tar zxvf netcdf-c-4.9.0.tar.gz
cd netcdf-c-4.9.0
CPPFLAGS="-I/home/wrfhydro/zlib/include -I/home/wrfhydro/hdf5/include" LDFLAGS="-L/home/wrfhydro/zlib/lib -L/home/wrfhydro/hdf5/lib" ./configure --prefix=/home/wrfhydro/netcdf  --disable-dap --enable-netcdf-4 --enable-netcdf4 --enable-shared
make
sudo make install

6.安装netcdf-fortran-4.6.0

tar zxvf netcdf-fortran-4.6.0.tar.gz
cd netcdf-fortran-4.6.0
CPPFLAGS="-I/home/wrfhydro/netcdf/include" LDFLAGS="-L/home/wrfhydro/netcdf/lib" ./configure --prefix=/home/wrfhydro/netcdf
make
sudo make install

7.安装wrf_hydro_nwm_public-5.2.0

tar zxfv wrf_hydro_nwm_public-5.2.0.tar.gz
cd wrf_hydro_nwm_public-5.2.0
cd trunk/NDHMS/template/
vim setEnvar.sh

修改文件内容与如下内容相同：

#!/bin/bash

# WRF-Hydro compile time options

# This is a WRF environment variable. Always set to 1=On for compiling WRF-Hydro.
export WRF_HYDRO=1

# Enhanced diagnostic output for debugging: 0=Off, 1=On.
export HYDRO_D=0

# Spatially distributed parameters for NoahMP: 0=Off, 1=On.
export SPATIAL_SOIL=1

# RAPID model: 0=Off, 1=On.
export WRF_HYDRO_RAPID=0

# WCOSS file units: 0=Off, 1=On.
export NCEP_WCOSS=0

# NWM output metadata: 0=Off, 1=On.
export NWM_META=0

# Streamflow nudging: 0=Off, 1=On.
export WRF_HYDRO_NUDGING=0

#Large netcdf file support: 0=Off,1=On.
export WRFIO_NCD_LARGE_FILE_SUPPORT=1

切换至模型的NDHMS目录内：

cd /home/wrf_hydro_nwm_public-5.2.0/trunk/NDHMS/
./configure

此处输入2选择gfrot编译器

2

开始执行编译脚本：

./compile_offline_NoahMP.sh template/setEnvar.sh

即出现下列语句为编译成功：

*****************************************************************
Make was successful
*****************************************************************

三、导入测试数据进行测试运行

首先

mkdir example_case && cd example_case
mkdir NWM
mkdir FORCING
mkdir Gridded_no_lakes
mkdir Reach
mkdir supplemental
mkdir Gridded && cd Gridded
mkdir DOMAIN
mkdir RESTART

然后复制*.TNL文件和wrf_hydro.exe文件至Gridded

cd 
cp wrf_hydro_nwm_public-5.2.0/trunk/NDHMS/Run/*.TBL example_case/Gridded
cp wrf_hydro_nwm_public-5.2.0/trunk/NDHMS/Run/wrf_hydro.exe example_case/Gridded

下载数据集并解压（作者的数据集依然是在windows系统下下载然后通过FinallShell传输到linux系统上的）

tar zxvf croton_NY_training_example_v5.2.tar.gz
#复制驱动数据到Gridded文件夹
cp -r example_case/FORCING/ /home/potato/example_case/Gridded
cp -r example_case/NWM/DOMAIN /home/potato/example_case/Gridded
cp -r example_case/NWM/RESTART /home/potato/example_case/Gridded
cp -r example_case/NWM/nudgingTimeSliceObs/ /home/potato/example_case/Gridded
cp -r example_case/NWM/namelist.hrldas /home/potato/example_case/Gridded
cp -r example_case/NWM/hydro.namelist /home/potato/example_case/Gridded
#运行
cd example_case/Gridded
mpirun -np 2 ./wrf_hydro.exe

检查是否成功：

tail -1 diag_hydro.00000