[3D-Caffe]Anaconda2+CUDA8+cuDNN5+OpenCV3编译3D-Caffe中遇到各种错误的解决方案

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环境

系统：Ubuntu 14.04.1
显卡：GeForce GTX 1080 Ti (Driver Version: 384.69)

Anaconda2
CUDA版本：v8.0.44
cuDNN版本：v5
OpenCV版本：v3.0.0

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配置

3D-Caffe源码下载地址：https://github.com/faustomilletari/3D-Caffe

  $  cd ~   
  $ git clone https://github.com/faustomilletari/3D-Caffe (先把源码拖到本地)
  $ cd 3D-Caffe
  $ cp Makefile.config.example Makefile.config (拷贝一份配置)
  $ vi Makefile.config  (对配置进行修改)

配置修改如下：

## Refer to http://caffe.berkeleyvision.org/installation.html
# Contributions simplifying and improving our build system are welcome!

# cuDNN acceleration switch (uncomment to build with cuDNN).
# USE_CUDNN := 1 【!!!去掉注释!!!】

# CPU-only switch (uncomment to build without GPU support).
# CPU_ONLY := 1

# To customize your choice of compiler, uncomment and set the following.
# N.B. the default for Linux is g++ and the default for OSX is clang++
# CUSTOM_CXX := g++

# CUDA directory contains bin/ and lib/ directories that we need.
CUDA_DIR := /usr/local/cuda
# On Ubuntu 14.04, if cuda tools are installed via
# "sudo apt-get install nvidia-cuda-toolkit" then use this instead:
# CUDA_DIR := /usr

# CUDA architecture setting: going with all of them.
# For CUDA < 6.0, comment the *_50 lines for compatibility.
CUDA_ARCH := -gencode arch=compute_20,code=sm_20 \
        -gencode arch=compute_20,code=sm_21 \
        -gencode arch=compute_30,code=sm_30 \
        -gencode arch=compute_35,code=sm_35 \
        -gencode arch=compute_50,code=sm_50 \
        -gencode arch=compute_50,code=compute_50

# BLAS choice:
# atlas for ATLAS (default)
# mkl for MKL
# open for OpenBlas
BLAS := atlas
# Custom (MKL/ATLAS/OpenBLAS) include and lib directories.
# Leave commented to accept the defaults for your choice of BLAS
# (which should work)!
# BLAS_INCLUDE := /path/to/your/blas
# BLAS_LIB := /path/to/your/blas

# Homebrew puts openblas in a directory that is not on the standard search path
# BLAS_INCLUDE := $(shell brew --prefix openblas)/include
# BLAS_LIB := $(shell brew --prefix openblas)/lib

# This is required only if you will compile the matlab interface.
# MATLAB directory should contain the mex binary in /bin.
# MATLAB_DIR := /usr/local
# MATLAB_DIR := /Applications/MATLAB_R2012b.app

# NOTE: this is required only if you will compile the python interface.
# We need to be able to find Python.h and numpy/arrayobject.h.
PYTHON_INCLUDE := /usr/include/python2.7 \ 【!!!加上注释!!!】
        /usr/lib/python2.7/dist-packages/numpy/core/include 【!!!加上注释!!!】
# Anaconda Python distribution is quite popular. Include path:
# Verify anaconda location, sometimes it's in root.
# ANACONDA_HOME := $(HOME)/anaconda 【!!!去掉注释!!!并修改对应anaconda的安装路径】
# PYTHON_INCLUDE := $(ANACONDA_HOME)/include \ 【!!!去掉注释!!!】
        # $(ANACONDA_HOME)/include/python2.7 \ 【!!!去掉注释!!!】
        # $(ANACONDA_HOME)/lib/python2.7/site-packages/numpy/core/include \ 【!!!去掉注释!!!】

# We need to be able to find libpythonX.X.so or .dylib.
PYTHON_LIB := /usr/lib  【!!!加上注释!!!】
# PYTHON_LIB := $(ANACONDA_HOME)/lib 【!!!去掉注释!!!】

# Homebrew installs numpy in a non standard path (keg only)
# PYTHON_INCLUDE += $(dir $(shell python -c 'import numpy.core; print(numpy.core.__file__)'))/include
# PYTHON_LIB += $(shell brew --prefix numpy)/lib

# Uncomment to support layers written in Python (will link against Python libs)
# WITH_PYTHON_LAYER := 1

# Whatever else you find you need goes here.
INCLUDE_DIRS := $(PYTHON_INCLUDE) /usr/local/include 【!!!添加hdf5路径,例如：/usr/include/hdf5/serial】
LIBRARY_DIRS := $(PYTHON_LIB) /usr/local/lib /usr/lib

# If Homebrew is installed at a non standard location (for example your home directory) and you use it for general dependencies
# INCLUDE_DIRS += $(shell brew --prefix)/include
# LIBRARY_DIRS += $(shell brew --prefix)/lib

# Uncomment to use `pkg-config` to specify OpenCV library paths.
# (Usually not necessary -- OpenCV libraries are normally installed in one of the above $LIBRARY_D