Stanford UFLDL教程 Exercise:PCA in 2D

Exercise:PCA in 2D

PCA, PCA whitening and ZCA whitening in 2D

In this exercise you will implement PCA, PCA whitening and ZCA whitening, as described in the earlier sections of this tutorial, and generate the images shown in the earlier sections yourself. You will build on the starter code that has been provided atpca_2d.zip. You need only write code at the places indicated by "YOUR CODE HERE" in the files. The only file you need to modify ispca_2d.m. Implementing this exercise will make the next exercise significantly easier to understand and complete.

Step 0: Load data

The starter code contains code to load 45 2D data points. When plotted using thescatter function, the results should look like the following:

Step 1: Implement PCA

In this step, you will implement PCA to obtain x_rot, the matrix in which the data is "rotated" to the basis comprising made up of the principal components. As mentioned in the implementation notes, you should make use of MATLAB'ssvd function here.

Step 1a: Finding the PCA basis

Find and, and draw two lines in your figure to show the resulting basis on top of the given data points. You may find it useful to use MATLAB's hold on and hold off functions. (After calling hold on, plotting functions such asplot will draw the new data on top of the previously existing figure rather than erasing and replacing it; andhold off turns this off.) You can use plot([x1,x2], [y1,y2], '-') to draw a line between(x1,y1) and (x2,y2). Your figure should look like this:

If you are doing this in Matlab, you will probably get a plot that's identical to ours. However, eigenvectors are defined only up to a sign. I.e., instead of returning as the first eigenvector, Matlab/Octave could just as easily have returned, and similarly instead of Matlab/Octave could have returned. So if you wound up with one or both of the eigenvectors pointing in a direction opposite (180 degrees difference) from what's shown above, that's okay too.

Step 1b: Check xRot

Compute xRot, and use the scatter function to check that xRot looks as it should, which should be something like the following:

Because Matlab/Octave could have returned and/or instead of and, it's also possible that you might have gotten a figure which is "flipped" or "reflected" along the- and/or-axis; a flipped/reflected version of this figure is also a completely correct result.

Step 2: Dimension reduce and replot

In the next step, set k, the number of components to retain, to be 1 (we have already done this for you). Compute the resultingxHat and plot the results. You should get the following (this figure shouldnot be flipped along the - or-axis):

Step 3: PCA Whitening

Implement PCA whitening using the formula from the notes. Plot xPCAWhite, and verify that it looks like the following (a figure that is flipped/reflected on either/both axes is also correct):

Step 4: ZCA Whitening

Implement ZCA whitening and plot the results. The results should look like the following (this should not be flipped/reflected along the- or-axis):

from: http://ufldl.stanford.edu/wiki/index.php/Exercise:PCA_in_2D