The problem is caused by adding some include and library to makefile.config or adding some environment variable in the user account which are related to opencvs.
One should eliminate the one which actually cause the problem and delete it. And re-login is required to solve this.
But in general, add matlab runtime library to environment variable or makefile.config will cause this problem during compiling caffe.
The problem log is following
/libopencv_highgui.so.2.4.9: undefined reference to TIFFReadRGBAStrip@LIBTIFF_4.0'
TIFFIsTiled@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFWriteScanline@LIBTIFF_4.0'
GOMP_parallel@GOMP_4.0’
//usr/lib/x86_64-linux-gnu/libsoxr.so.0: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFGetField@LIBTIFF_4.0'
TIFFScanlineSize@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFReadEncodedTile@LIBTIFF_4.0'
TIFFReadRGBATile@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFClose@LIBTIFF_4.0'
TIFFRGBAImageOK@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFOpen@LIBTIFF_4.0'
TIFFReadEncodedStrip@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFSetField@LIBTIFF_4.0'
TIFFSetWarningHandler@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFSetErrorHandler@LIBTIFF_4.0'
TIFFReadRGBAStrip@LIBTIFF_4.0’
collect2: error: ld returned 1 exit status
tools/CMakeFiles/upgrade_net_proto_text.dir/build.make:134: recipe for target 'tools/upgrade_net_proto_text' failed
make[2]: *** [tools/upgrade_net_proto_text] Error 1
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFIsTiled@LIBTIFF_4.0'
TIFFWriteScanline@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
//usrCMakeFiles/Makefile2:701: recipe for target ‘tools/CMakeFiles/upgrade_net_proto_text.dir/all’ failed
/make[1]: * [tools/CMakeFiles/upgrade_net_proto_text.dir/all] Error 2
lib/make[1]: * Waiting for unfinished jobs….
x86_64-linux-gnu/libsoxr.so.0: undefined reference to GOMP_parallel@GOMP_4.0'
TIFFGetField@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFScanlineSize@LIBTIFF_4.0'
TIFFReadEncodedTile@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFReadRGBATile@LIBTIFF_4.0'
TIFFClose@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFRGBAImageOK@LIBTIFF_4.0'
TIFFOpen@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFReadEncodedStrip@LIBTIFF_4.0'
TIFFSetField@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFSetWarningHandler@LIBTIFF_4.0'
TIFFSetErrorHandler@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
collect2: error: ld returned 1 exit status
tools/CMakeFiles/compute_image_mean.dir/build.make:134: recipe for target ‘tools/compute_image_mean’ failed
make[2]: * [tools/compute_image_mean] Error 1
CMakeFiles/Makefile2:473: recipe for target ‘tools/CMakeFiles/compute_image_mean.dir/all’ failed
make[1]: * [tools/CMakeFiles/compute_image_mean.dir/all] Error 2
[ 90%] Linking CXX executable extract_features
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFReadRGBAStrip@LIBTIFF_4.0'
TIFFIsTiled@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFWriteScanline@LIBTIFF_4.0'
GOMP_parallel@GOMP_4.0’
//usr/lib/x86_64-linux-gnu/libsoxr.so.0: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFGetField@LIBTIFF_4.0'
TIFFScanlineSize@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFReadEncodedTile@LIBTIFF_4.0'
TIFFReadRGBATile@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFClose@LIBTIFF_4.0'
TIFFRGBAImageOK@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFOpen@LIBTIFF_4.0'
TIFFReadEncodedStrip@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFSetField@LIBTIFF_4.0'
TIFFSetWarningHandler@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFSetErrorHandler@LIBTIFF_4.0'
TIFFReadRGBAStrip@LIBTIFF_4.0’
collect2: error: ld returned 1 exit status
tools/CMakeFiles/extract_features.dir/build.make:134: recipe for target 'tools/extract_features' failed
make[2]: *** [tools/extract_features] Error 1
CMakeFiles/Makefile2:739: recipe for target 'tools/CMakeFiles/extract_features.dir/all' failed
make[1]: *** [tools/CMakeFiles/extract_features.dir/all] Error 2
[ 90%] Linking CXX executable caffe
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFIsTiled@LIBTIFF_4.0'
TIFFWriteScanline@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
//usr/lib/x86_64-linux-gnu/libsoxr.so.0: undefined reference to GOMP_parallel@GOMP_4.0'
TIFFGetField@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFScanlineSize@LIBTIFF_4.0'
TIFFReadEncodedTile@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFReadRGBATile@LIBTIFF_4.0'
TIFFClose@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFRGBAImageOK@LIBTIFF_4.0'
TIFFOpen@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFReadEncodedStrip@LIBTIFF_4.0'
TIFFSetField@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to TIFFSetWarningHandler@LIBTIFF_4.0'
TIFFSetErrorHandler@LIBTIFF_4.0’
/usr/lib/x86_64-linux-gnu/libopencv_highgui.so.2.4.9: undefined reference to
collect2: error: ld returned 1 exit status
tools/CMakeFiles/caffe.bin.dir/build.make:134: recipe for target ‘tools/caffe’ failed
make[2]: * [tools/caffe] Error 1
CMakeFiles/Makefile2:663: recipe for target ‘tools/CMakeFiles/caffe.bin.dir/all’ failed
make[1]: * [tools/CMakeFiles/caffe.bin.dir/all] Error 2
Makefile:127: recipe for target ‘all’ failed