如何将一个dense矩阵,比如:一个 N × N N \times N N×N 的邻接矩阵a 转成 pytorch的sparse coo 矩阵。
方法一:
import numpy as np
import torch
a = np.array([[0, 1.2, 0],[2, 3.1, 0],[0.5, 0, 0]])
idx = a.nonzero() # (row, col)
data = a[idx]
# to torch tensor
idx_t = torch.LongTensor(np.vstack(idx))
data_t = torch.FloatTensor(data)
coo_a = torch.sparse_coo_tensor(idx_t, data_t, a.shape)
print(coo_a)
方法二:
import scipy.sparse as sp
import numpy as np
import torch
a = np.array([[0, 1.2, 0],[2, 3.1, 0],[0.5, 0, 0]])
coo_np = sp.coo_matrix(a)
data = coo_np.data
idx_t = torch.LongTensor(np.vstack((coo_np.row, coo_np.col)))
data_t = torch.FloatTensor(data)
coo_a=torch.sparse_coo_tensor(idx_t,data_t,a.shape)
方法三(从tensor到sparse tensor):
import numpy as np
import torch
a = torch.tensor([[0, 1.2, 0],[2, 3.1, 0],[0.5, 0, 0]])
idx = torch.nonzero(a).T # 这里需要转置一下
data = a[idx[0],idx[1]]
coo_a = torch.sparse_coo_tensor(idx, data, a.shape)
print(coo_a)