CentOS7安装 SGE

CentOS7 系统安装

略

安装环境为CentOS7虚拟机，工作站配置选项

安装方法1

cd /etc/yum.repos.d/
sudo wget https://copr.fedorainfracloud.org/coprs/loveshack/SGE/repo/epel-7/loveshack-SGE-epel-7.repo
sudo yum install gridengine

安装方法2

下载源代码

cd ~/Downloads
#wget https://arc.liv.ac.uk/downloads/SGE/releases/8.1.9/gridengine-8.1.9-1.el6.x86_64.rpm
wget https://arc.liv.ac.uk/downloads/SGE/releases/8.1.9/sge-8.1.9.tar.gz
tar -xvf sge-8.1.9.tar.gz
cd sge-8.1.9

安装依赖

## 安装 jemalloc（http://jemalloc.net/）
sudo yum install jemalloc-devel 
sudo yum install openssl-devel 
sudo yum install ncurses-devel 
sudo yum install pam-devel 
sudo yum install libXmu-devel 
## 安装 hwloc（https://www.open-mpi.org/projects/hwloc/）
sudo yum install hwloc-devel hwloc hwloc-libs 
## 安装 java
sudo yum install java-1.8.0-openjdk-devel
sudo yum install java-1.8.0-openjdk
#sudo update-alternatives --config java
## 安装 javacc （https://javacc.github.io/javacc/）
sudo yum install java-devel javacc ant-junit 
sudo yum install libdb-devel motif-devel 
sudo yum install csh ksh xterm 
sudo yum install db4-utils 
sudo yum install perl-XML-Simple perl-Env 
sudo yum install munge-libs
sudo yum install xorg-x11-fonts-ISO8859-1-100dpi xorg-x11-fonts-ISO8859-1-75dpi

下一步是为了编译 GUI 界面，不需要的可以跳过

cd ~/Downloads
## 安装 IzPack
wget https://oss.sonatype.org/content/repositories/releases/org/codehaus/izpack/izpack-dist/5.1.3/izpack-dist-5.1.3.jar
sudo java -jar izpack-dist-5.1.3-installer.jar

安装 SGE¹²

cd source/
sh scripts/bootstrap.sh
./aimk
./aimk -man
## 查看支持的架构
sh scripts/distinst -help_arch
## 切换到root账号执行安装
su
mkdir -p /opt/sge
export SGE_ROOT=/opt/sge
echo y | scripts/distinst -local -noexit -allall lx-amd64
exit

配置

cd /opt/sge
./start_gui_installer

## SGE
export SGE_ROOT=/opt/sge
export PATH=$SGE_ROOT/bin:$PATH

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1. https://arc.liv.ac.uk/trac/SGE ↩︎

2. http://www.softpanorama.org/HPC/Grid_engine/Implementations/Oracle/installation_of_oracle_sge_master_host.shtml ↩︎