原始数据
测试数据集irisdata.txt
格式如下,
其中,Iris-setosa/Iris-versicolor/Iris-virginica表示类别
5.1,3.5,1.4,0.2,Iris-setosa
4.9,3.0,1.4,0.2,Iris-setosa
4.7,3.2,1.3,0.2,Iris-setosa
4.6,3.1,1.5,0.2,Iris-setosa
5.0,3.6,1.4,0.2,Iris-setosa
5.4,3.9,1.7,0.4,Iris-setosa
4.6,3.4,1.4,0.3,Iris-setosa
5.0,3.4,1.5,0.2,Iris-setosa
4.4,2.9,1.4,0.2,Iris-setosa
4.9,3.1,1.5,0.1,Iris-setosa
5.4,3.7,1.5,0.2,Iris-setosa
4.8,3.4,1.6,0.2,Iris-setosa
4.8,3.0,1.4,0.1,Iris-setosa
4.3,3.0,1.1,0.1,Iris-setosa
5.8,4.0,1.2,0.2,Iris-setosa
5.7,4.4,1.5,0.4,Iris-setosa
5.4,3.9,1.3,0.4,Iris-setosa
5.1,3.5,1.4,0.3,Iris-setosa
5.7,3.8,1.7,0.3,Iris-setosa
5.1,3.8,1.5,0.3,Iris-setosa
5.4,3.4,1.7,0.2,Iris-setosa
5.1,3.7,1.5,0.4,Iris-setosa
4.6,3.6,1.0,0.2,Iris-setosa
5.1,3.3,1.7,0.5,Iris-setosa
4.8,3.4,1.9,0.2,Iris-setosa
5.0,3.0,1.6,0.2,Iris-setosa
5.0,3.4,1.6,0.4,Iris-setosa
5.2,3.5,1.5,0.2,Iris-setosa
5.2,3.4,1.4,0.2,Iris-setosa
4.7,3.2,1.6,0.2,Iris-setosa
4.8,3.1,1.6,0.2,Iris-setosa
5.4,3.4,1.5,0.4,Iris-setosa
5.2,4.1,1.5,0.1,Iris-setosa
5.5,4.2,1.4,0.2,Iris-setosa
4.9,3.1,1.5,0.1,Iris-setosa
5.0,3.2,1.2,0.2,Iris-setosa
5.5,3.5,1.3,0.2,Iris-setosa
4.9,3.1,1.5,0.1,Iris-setosa
4.4,3.0,1.3,0.2,Iris-setosa
5.1,3.4,1.5,0.2,Iris-setosa
5.0,3.5,1.3,0.3,Iris-setosa
4.5,2.3,1.3,0.3,Iris-setosa
4.4,3.2,1.3,0.2,Iris-setosa
5.0,3.5,1.6,0.6,Iris-setosa
5.1,3.8,1.9,0.4,Iris-setosa
4.8,3.0,1.4,0.3,Iris-setosa
5.1,3.8,1.6,0.2,Iris-setosa
4.6,3.2,1.4,0.2,Iris-setosa
5.3,3.7,1.5,0.2,Iris-setosa
5.0,3.3,1.4,0.2,Iris-setosa
7.0,3.2,4.7,1.4,Iris-versicolor
6.4,3.2,4.5,1.5,Iris-versicolor
6.9,3.1,4.9,1.5,Iris-versicolor
5.5,2.3,4.0,1.3,Iris-versicolor
6.5,2.8,4.6,1.5,Iris-versicolor
5.7,2.8,4.5,1.3,Iris-versicolor
6.3,3.3,4.7,1.6,Iris-versicolor
4.9,2.4,3.3,1.0,Iris-versicolor
6.6,2.9,4.6,1.3,Iris-versicolor
5.2,2.7,3.9,1.4,Iris-versicolor
5.0,2.0,3.5,1.0,Iris-versicolor
5.9,3.0,4.2,1.5,Iris-versicolor
6.0,2.2,4.0,1.0,Iris-versicolor
6.1,2.9,4.7,1.4,Iris-versicolor
5.6,2.9,3.6,1.3,Iris-versicolor
6.7,3.1,4.4,1.4,Iris-versicolor
5.6,3.0,4.5,1.5,Iris-versicolor
5.8,2.7,4.1,1.0,Iris-versicolor
6.2,2.2,4.5,1.5,Iris-versicolor
5.6,2.5,3.9,1.1,Iris-versicolor
5.9,3.2,4.8,1.8,Iris-versicolor
6.1,2.8,4.0,1.3,Iris-versicolor
6.3,2.5,4.9,1.5,Iris-versicolor
6.1,2.8,4.7,1.2,Iris-versicolor
6.4,2.9,4.3,1.3,Iris-versicolor
6.6,3.0,4.4,1.4,Iris-versicolor
6.8,2.8,4.8,1.4,Iris-versicolor
6.7,3.0,5.0,1.7,Iris-versicolor
6.0,2.9,4.5,1.5,Iris-versicolor
5.7,2.6,3.5,1.0,Iris-versicolor
5.5,2.4,3.8,1.1,Iris-versicolor
5.5,2.4,3.7,1.0,Iris-versicolor
5.8,2.7,3.9,1.2,Iris-versicolor
6.0,2.7,5.1,1.6,Iris-versicolor
5.4,3.0,4.5,1.5,Iris-versicolor
6.0,3.4,4.5,1.6,Iris-versicolor
6.7,3.1,4.7,1.5,Iris-versicolor
6.3,2.3,4.4,1.3,Iris-versicolor
5.6,3.0,4.1,1.3,Iris-versicolor
5.5,2.5,4.0,1.3,Iris-versicolor
5.5,2.6,4.4,1.2,Iris-versicolor
6.1,3.0,4.6,1.4,Iris-versicolor
5.8,2.6,4.0,1.2,Iris-versicolor
5.0,2.3,3.3,1.0,Iris-versicolor
5.6,2.7,4.2,1.3,Iris-versicolor
5.7,3.0,4.2,1.2,Iris-versicolor
5.7,2.9,4.2,1.3,Iris-versicolor
6.2,2.9,4.3,1.3,Iris-versicolor
5.1,2.5,3.0,1.1,Iris-versicolor
5.7,2.8,4.1,1.3,Iris-versicolor
6.3,3.3,6.0,2.5,Iris-virginica
5.8,2.7,5.1,1.9,Iris-virginica
7.1,3.0,5.9,2.1,Iris-virginica
6.3,2.9,5.6,1.8,Iris-virginica
6.5,3.0,5.8,2.2,Iris-virginica
7.6,3.0,6.6,2.1,Iris-virginica
4.9,2.5,4.5,1.7,Iris-virginica
7.3,2.9,6.3,1.8,Iris-virginica
6.7,2.5,5.8,1.8,Iris-virginica
7.2,3.6,6.1,2.5,Iris-virginica
6.5,3.2,5.1,2.0,Iris-virginica
6.4,2.7,5.3,1.9,Iris-virginica
6.8,3.0,5.5,2.1,Iris-virginica
5.7,2.5,5.0,2.0,Iris-virginica
5.8,2.8,5.1,2.4,Iris-virginica
6.4,3.2,5.3,2.3,Iris-virginica
6.5,3.0,5.5,1.8,Iris-virginica
7.7,3.8,6.7,2.2,Iris-virginica
7.7,2.6,6.9,2.3,Iris-virginica
6.0,2.2,5.0,1.5,Iris-virginica
6.9,3.2,5.7,2.3,Iris-virginica
5.6,2.8,4.9,2.0,Iris-virginica
7.7,2.8,6.7,2.0,Iris-virginica
6.3,2.7,4.9,1.8,Iris-virginica
6.7,3.3,5.7,2.1,Iris-virginica
7.2,3.2,6.0,1.8,Iris-virginica
6.2,2.8,4.8,1.8,Iris-virginica
6.1,3.0,4.9,1.8,Iris-virginica
6.4,2.8,5.6,2.1,Iris-virginica
7.2,3.0,5.8,1.6,Iris-virginica
7.4,2.8,6.1,1.9,Iris-virginica
7.9,3.8,6.4,2.0,Iris-virginica
6.4,2.8,5.6,2.2,Iris-virginica
6.3,2.8,5.1,1.5,Iris-virginica
6.1,2.6,5.6,1.4,Iris-virginica
7.7,3.0,6.1,2.3,Iris-virginica
6.3,3.4,5.6,2.4,Iris-virginica
6.4,3.1,5.5,1.8,Iris-virginica
6.0,3.0,4.8,1.8,Iris-virginica
6.9,3.1,5.4,2.1,Iris-virginica
6.7,3.1,5.6,2.4,Iris-virginica
6.9,3.1,5.1,2.3,Iris-virginica
5.8,2.7,5.1,1.9,Iris-virginica
6.8,3.2,5.9,2.3,Iris-virginica
6.7,3.3,5.7,2.5,Iris-virginica
6.7,3.0,5.2,2.3,Iris-virginica
6.3,2.5,5.0,1.9,Iris-virginica
6.5,3.0,5.2,2.0,Iris-virginica
6.2,3.4,5.4,2.3,Iris-virginica
5.9,3.0,5.1,1.8,Iris-virginica
源码
# !/usr/bin/env python
# -*- coding: utf-8 -*-
# Author: Justin Chan
import csv
import random
import math
import operator
#装载数据集函数
#filename数据集文件
#filename数据集分为两部分,一个是训练集trainingSet,一个是测试集testSet.
#split用来将原始数据集分为训练集和测试集的界限。
def loadDataset(filename, split, trainingSet = [], testSet = []):
with open(filename,'rb') as csvfile:
lines = csv.reader(csvfile)#读取所有行
dataset = list(lines)
for x in range(len(dataset)-1):
for y in range(4):
dataset[x][y] = float(dataset[x][y])
if random.random() < split:#随机一个数与split比较,大的装载到测试集,小的装载的数据集。
trainingSet.append(dataset[x])
else:
testSet.append(dataset[x])
#计算坐标两个实例的直线距离,length表示维度
def euclideanDistance(instance1,instance2,length):
distance = 0
for x in range(length):
distance += pow((instance1[x] - instance2[x]),2)#计算两个点所有维度的平方和
return math.sqrt(distance)
#返回最近的k个邻居
def getNeighbors(trainingSet,testInstance,k):
distances = []
length = len(testInstance)-1 #测试实例的维度
for x in range(len(trainingSet)):
dist = euclideanDistance(testInstance,trainingSet[x],length)
distances.append((trainingSet[x],dist))
distances.sort(key=operator.itemgetter(1))#把距离从小到大排序
neighbors = []
for x in range(k):
neighbors.append(distances[x][0])
return neighbors
#在邻居中取得最近的那个邻居
def getResponse(neighbors):
classVotes = {}
for x in range(len(neighbors)):
response = neighbors[x][-1]
if response in classVotes:
classVotes[response] += 1
else:
classVotes[response] = 1
sortedVotes = sorted(classVotes.items(),key=operator.itemgetter(1),reverse=True)#每个类进行降序排列
return sortedVotes[0][0]
#计算测试集的准确率
def getAccuracy(testSet,predictions):
correct = 0#预测对的个数
for x in range(len(testSet)):
if testSet[x][-1] == predictions[x]:#下标-1即表示最后一个值,这里就是label
correct += 1
return (correct/float(len(testSet)))*100.0
def main():
#prepare data
trainingSet = []
testSet = []
split = 0.67
loadDataset(r'/home/justin18chan/PycharmProjects/tensorflowProj/KNearestNeighbor/irisdata.txt', split, trainingSet, testSet)#在传路径时,加r表示后面传的是原始字符串,忽略特殊字符
print('Train set:' + repr(len(trainingSet)))
print('Test set:' + repr(len(testSet)))
#gengrate prediction
predictions = []
k = 3
for x in range(len(testSet)):
neighbors = getNeighbors(trainingSet, testSet[x], k)
result = getResponse(neighbors)
predictions.append(result)
print('> predicted' + repr(result) + ',actual' + repr(testSet[x][-1]))
accuracy = getAccuracy(testSet,predictions)
print('Accuracy:' + repr(accuracy) + '%')
main()
遇到的问题
1.在读取csv文件时,打开文件格式错误,要用‘rt’打开。
with open(filename,'rb') as csvfile:
lines = csv.reader(csvfile)#读取所有行
dataset = list(lines)
_csv.Error: iterator should return strings, not bytes (did you open the file in text mode?
原因是csv文件是文本文件,不是二进制文件,不能用‘rb’格式打开。文本文件打开要用rt。
2.在python3.X中是classVotes.items(),在2.X是iteritems().
sorted(classVotes.items(),key=operator.itemgetter(1),reverse=True)
运算结果
/usr/bin/python3.5 xxxxx/KNearestNeighbor/KnnImplementation.py
Train set:92
Test set:57
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-setosa',actual'Iris-setosa'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-virginica',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-versicolor',actual'Iris-versicolor'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-versicolor',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-versicolor',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
> predicted'Iris-virginica',actual'Iris-virginica'
Accuracy:94.73684210526315%