cellranger count 报错：一次性向服务器投递多个任务

红鲤绿与鱼

于 2024-07-04 21:02:38 发布

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文章标签：服务器 linux

本文链接：https://blog.csdn.net/m0_60116853/article/details/140189800

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[error] Pipestance failed. Error log at:
CRR784296_LLW1_count/SC_RNA_COUNTER_CS/SC_MULTI_CORE/MULTI_GEM_WELL_PROCESSOR/COUNT_GEM_WELL_PROCESSOR/_BASIC_SC_RNA_COUNTER/_MATRIX_COMPUTER/ALIGN_AND_COUNT/fork0/chnk09-u849e865f68/_errors

Log message:
Job failed in stage code

signal: killed


Waiting 6 seconds for UI to do final refresh.
Pipestance failed. Use --noexit option to keep UI running after failure.

2024-07-04 19:23:28 Shutting down.
Saving pipestance info to "CRR784296_LLW1_count/CRR784296_LLW1_count.mri.tgz"
For assistance, upload this file to 10x Genomics by running:

cellranger upload <your_email> "CRR784296_LLW1_count/CRR784296_LLW1_count.mri.tgz"